- 2KB_upstream_variant - SO:0001636
- 3D_polypeptide_structure_variant - SO:0001599
- 3_prime_UTR_variant - SO:0001624
- 500B_downstream_variant - SO:0001634
- 5KB_downstream_variant - SO:0001633
- 5KB_upstream_variant - SO:0001635
- 5_prime_UTR_variant - SO:0001623
- ARS - SO:0000436
- ASPE_primer - SO:0001698
- AU_rich_element - SO:0001180
- A_box - SO:0000619
- A_box_type_1 - SO:0001675
- A_box_type_2 - SO:0001676
- A_minor_RNA_motif - SO:0000022
- A_to_C_transversion - SO:1000024
- A_to_G_transition - SO:1000015
- A_to_T_transversion - SO:1000025
- BAC - SO:0000153
- BAC_clone - SO:0000764
- BAC_cloned_genomic_insert - SO:0000992
- BAC_end - SO:0000999
- BREd_motif - SO:0001663
- BREu_motif - SO:0000016
- B_box - SO:0000620
- Bruno_response_element - SO:0001181
- CAAT_signal - SO:0000172
- CCA_tail - SO:0001175
- CDS - SO:0000316
- CDS_fragment - SO:0001384
- CDS_independently_known - SO:1001246
- CDS_predicted - SO:1001254
- CDS_region - SO:0000851
- CDS_supported_by_EST_or_cDNA_data - SO:1001259
- CDS_supported_by_domain_match_data - SO:1001249
- CDS_supported_by_sequence_similarity_data - SO:1001251
- CHiP_seq_region - SO:0001697
- CRISPR - SO:0001459
- CRM - SO:0000727
- CTG_start_codon - SO:1001273
- C_D_box_snoRNA - SO:0000593
- C_D_box_snoRNA_encoding - SO:0000585
- C_D_box_snoRNA_primary_transcript - SO:0000595
- C_box - SO:0000622
- C_cluster - SO:0000558
- C_gene - SO:0000478
- C_to_A_transversion - SO:1000019
- C_to_G_transversion - SO:1000020
- C_to_T_transition - SO:1000011
- C_to_T_transition_at_pCpG_site - SO:1000012
- CpG_island - SO:0000307
- CsrB_RsmB_RNA - SO:0000377
- DArT_marker - SO:0001646
- DCE - SO:0001664
- DCE_SI - SO:0001665
- DCE_SII - SO:0001666
- DCE_SIII - SO:0001667
- DHU_loop - SO:0001176
- DJ_C_cluster - SO:0000539
- DJ_J_C_cluster - SO:0000540
- DJ_J_cluster - SO:0000485
- DJ_gene - SO:0000572
- DMv1_motif - SO:0001165
- DMv2_motif - SO:0001161
- DMv3_motif - SO:0001160
- DMv4_motif - SO:0001157
- DMv5_motif - SO:0001159
- DNA - SO:0000352
- DNA_aptamer - SO:0000032
- DNA_binding_site - SO:0001429
- DNA_chromosome - SO:0000954
- DNA_constraint_sequence - SO:0001009
- DNA_invertase_target_sequence - SO:0000660
- DNA_motif - SO:0000713
- DNA_replication_mode - SO:0000971
- DNA_sequence_secondary_structure - SO:0000142
- DNA_transposon - SO:0000182
- DNAseI_hypersensitive_site - SO:0000685
- DNAzyme - SO:0001012
- DPE1_motif - SO:0001164
- DPE_motif - SO:0000015
- DRE_motif - SO:0001156
- D_DJ_C_cluster - SO:0000504
- D_DJ_J_C_cluster - SO:0000506
- D_DJ_J_cluster - SO:0000508
- D_DJ_cluster - SO:0000505
- D_J_C_cluster - SO:0000509
- D_J_cluster - SO:0000560
- D_cluster - SO:0000559
- D_gene - SO:0000458
- D_gene_recombination_feature - SO:0000492
- D_loop - SO:0000297
- DsrA_RNA - SO:0000378
- EST - SO:0000345
- EST_match - SO:0000668
- E_box_motif - SO:0001158
- FRT_flanked - SO:0000361
- FRT_site - SO:0000350
- GAGA_motif - SO:0001166
- GC_rich_promoter_region - SO:0000173
- GNA - SO:0001192
- GNA_oligo - SO:0001193
- G_quartet - SO:0000003
- G_to_A_transition - SO:1000016
- G_to_C_transversion - SO:1000026
- G_to_T_transversion - SO:1000027
- GcvB_RNA - SO:0000379
- H2BK5_monomethylation_site - SO:0001714
- H2B_ubiquitination_site - SO:0001717
- H3K14_acetylation_site - SO:0001704
- H3K18_acetylation_site - SO:0001718
- H3K23_acylation site - SO:0001719
- H3K27_acylation_site - SO:0001721
- H3K27_dimethylation_site - SO:0001726
- H3K27_methylation_site - SO:0001732
- H3K27_monomethylation_site - SO:0001708
- H3K27_trimethylation_site - SO:0001709
- H3K36_dimethylation_site - SO:0001723
- H3K36_methylation_site - SO:0001733
- H3K36_monomethylation_site - SO:0001722
- H3K36_trimethylation_site - SO:0001724
- H3K4_dimethylation_site - SO:0001725
- H3K4_methylation_site - SO:0001734
- H3K4_monomethylation_site - SO:0001705
- H3K4_trimethylation - SO:0001706
- H3K79_dimethylation_site - SO:0001711
- H3K79_methylation_site - SO:0001735
- H3K79_monomethylation_site - SO:0001710
- H3K79_trimethylation_site - SO:0001712
- H3K9_acetylation_site - SO:0001703
- H3K9_dimethylation_site - SO:0001728
- H3K9_methylation_site - SO:0001736
- H3K9_monomethylation_site - SO:0001727
- H3K9_trimethylation_site - SO:0001707
- H4K16_acylation_site - SO:0001729
- H4K20_monomethylation_site - SO:0001713
- H4K5_acylation_site - SO:0001730
- H4K8_acylation site - SO:0001731
- H4K_acylation_region - SO:0001738
- H_ACA_box_snoRNA - SO:0000594
- H_ACA_box_snoRNA_encoding - SO:0000608
- H_ACA_box_snoRNA_primary_transcript - SO:0000596
- H_pseudoknot - SO:0000592
- Hoogsteen_base_pair - SO:0000500
- INR1_motif - SO:0001163
- INR_motif - SO:0000014
- IRLinv_site - SO:0001046
- IRRinv_site - SO:0001047
- ISRE - SO:0001715
- J_C_cluster - SO:0000511
- J_cluster - SO:0000513
- J_gene - SO:0000470
- J_gene_recombination_feature - SO:0000302
- J_heptamer - SO:0000515
- J_nonamer - SO:0000514
- J_spacer - SO:0000517
- K_turn_RNA_motif - SO:0000023
- LINE_element - SO:0000194
- LNA - SO:0001188
- LNA_oligo - SO:0001189
- LTR_component - SO:0000848
- LTR_retrotransposon - SO:0000186
- MITE - SO:0000338
- MNP - SO:0001013
- MTE - SO:0001162
- MicF_RNA - SO:0000383
- N2_2_prime_O_dimethylguanosine - SO:0001329
- N2_7_2prirme_O_trimethylguanosine - SO:0001343
- N2_7_dimethylguanosine - SO:0001338
- N2_N2_2_prime_O_trimethylguanosine - SO:0001330
- N2_N2_7_trimethylguanosine - SO:0001339
- N2_N2_dimethylguanosine - SO:0001328
- N2_methylguanosine - SO:0001325
- N4_2_prime_O_dimethylcytidine - SO:0001291
- N4_N4_2_prime_O_trimethylcytidine - SO:0001294
- N4_acetyl_2_prime_O_methylcytidine - SO:0001288
- N4_acetylcytidine - SO:0001285
- N4_methylcytidine - SO:0001290
- N6_2_prime_O_dimethyladenosine - SO:0001312
- N6_N6_2_prime_O_trimethyladenosine - SO:0001313
- N6_N6_dimethyladenosine - SO:0001311
- N6_acetyladenosine - SO:0001315
- N6_cis_hydroxyisopentenyl_adenosine - SO:0001302
- N6_glycinylcarbamoyladenosine - SO:0001304
- N6_hydroxynorvalylcarbamoyladenosine - SO:0001308
- N6_isopentenyladenosine - SO:0001300
- N6_methyl_N6_threonylcarbamoyladenosine - SO:0001307
- N6_methyladenosine - SO:0001297
- N6_threonylcarbamoyladenosine - SO:0001305
- NDM2_motif - SO:0001167
- NDM3_motif - SO:0001168
- NMD_transcript_variant - SO:0001621
- ORF - SO:0000236
- OxyS_RNA - SO:0000384
- PAC - SO:0000154
- PAC_clone - SO:0000762
- PAC_end - SO:0001480
- PCR_product - SO:0000006
- PNA - SO:0001184
- PNA_oligo - SO:0001011
- PSE_motif - SO:0000017
- Phage_RNA_Polymerase_Promoter - SO:0001204
- QTL - SO:0000771
- RAPD - SO:0001481
- RFLP_fragment - SO:0000193
- RH_map - SO:0001252
- RNA - SO:0000356
- RNA_6S - SO:0000376
- RNA_aptamer - SO:0000033
- RNA_chromosome - SO:0000961
- RNA_hook_turn - SO:0000027
- RNA_internal_loop - SO:0000020
- RNA_junction_loop - SO:0000026
- RNA_motif - SO:0000715
- RNA_polymerase_III_TATA_box - SO:0001662
- RNA_polymerase_II_TATA_box - SO:0001661
- RNA_polymerase_promoter - SO:0001203
- RNA_replication_mode - SO:0000972
- RNA_sequence_secondary_structure - SO:0000122
- RNAi_reagent - SO:0000337
- RNApol_III_promoter - SO:0000171
- RNApol_III_promoter_type_1 - SO:0000617
- RNApol_III_promoter_type_1_region - SO:0000845
- RNApol_III_promoter_type_2 - SO:0000618
- RNApol_III_promoter_type_2_region - SO:0000846
- RNApol_III_promoter_type_3 - SO:0000621
- RNApol_II_core_promoter - SO:0001669
- RNApol_II_promoter - SO:0000170
- RNApol_II_promoter_region - SO:0000844
- RNApol_I_promoter - SO:0000169
- RNase_MRP_RNA - SO:0000385
- RNase_MRP_RNA_gene - SO:0001640
- RNase_P_RNA - SO:0000386
- RNase_P_RNA_gene - SO:0001639
- RRE_RNA - SO:0000388
- RR_tract - SO:0000435
- RST - SO:0001467
- RST_match - SO:0001471
- R_GNA - SO:0001194
- R_GNA_oligo - SO:0001195
- R_LTR_region - SO:0000423
- R_five_prime_LTR_region - SO:0000427
- R_three_prime_LTR_region - SO:0000430
- Robertsonian_fusion - SO:1000043
- RprA_RNA - SO:0000387
- SAGE_tag - SO:0000326
- SECIS_element - SO:1001274
- SINE_element - SO:0000206
- SL10_accceptor_site - SO:0001755
- SL11_acceptor_site - SO:0001756
- SL12_acceptor_site - SO:0001757
- SL1_acceptor_site - SO:0000708
- SL2_acceptor_site - SO:0000709
- SL3_acceptor_site - SO:0001748
- SL4_acceptor_site - SO:0001749
- SL5_acceptor_site - SO:0001750
- SL6_acceptor_site - SO:0001751
- SL7_acceptor_site - SO:0001752
- SL8_acceptor_site - SO:0001753
- SL9_acceptor_site - SO:0001754
- SNP - SO:0000694
- SNV - SO:0001483
- SP6_RNA_Polymerase_Promoter - SO:0001205
- SRP_RNA - SO:0000590
- SRP_RNA_encoding - SO:0000642
- SRP_RNA_gene - SO:0001269
- SRP_RNA_primary_transcript - SO:0000589
- STS - SO:0000331
- STS_map - SO:0001251
- S_GNA - SO:0001196
- S_GNA_oligo - SO:0001197
- Sequence_Ontology - SO:0000000
- Shine_Dalgarno_sequence - SO:0000552
- T3_RNA_Polymerase_Promoter - SO:0001206
- T7_RNA_Polymerase_Promoter - SO:0001207
- TATA_box - SO:0000174
- TF_binding_site - SO:0000235
- TF_binding_site_variant - SO:0001782
- TNA - SO:0001190
- TNA_oligo - SO:0001191
- TSS - SO:0000315
- TSS_region - SO:0001240
- T_loop - SO:0001177
- T_to_A_transversion - SO:1000021
- T_to_C_transition - SO:1000013
- T_to_G_transversion - SO:1000022
- U11_snRNA - SO:0000398
- U12_intron - SO:0000295
- U12_snRNA - SO:0000399
- U14_snoRNA - SO:0000403
- U14_snoRNA_primary_transcript - SO:0005837
- U1_snRNA - SO:0000391
- U2_intron - SO:0000184
- U2_snRNA - SO:0000392
- U3_LTR_region - SO:0000424
- U3_five_prime_LTR_region - SO:0000429
- U3_snoRNA - SO:0001179
- U3_three_prime_LTR_region - SO:0000431
- U4_snRNA - SO:0000393
- U4atac_snRNA - SO:0000394
- U5_LTR_region - SO:0000422
- U5_five_prime_LTR_region - SO:0000428
- U5_snRNA - SO:0000395
- U5_three_prime_LTR_region - SO:0000432
- U6_snRNA - SO:0000396
- U6atac_snRNA - SO:0000397
- UAA_stop_codon_signal - SO:1001283
- UAG_stop_codon_signal - SO:1001282
- UGA_stop_codon_signal - SO:1001285
- UPD - SO:0001744
- UST - SO:0001464
- UST_match - SO:0001470
- UTR - SO:0000203
- UTR_intron - SO:0000446
- UTR_region - SO:0000837
- UTR_variant - SO:0001622
- U_box - SO:0001788
- VDJ_C_cluster - SO:0000541
- VDJ_J_C_cluster - SO:0000487
- VDJ_J_cluster - SO:0000488
- VDJ_gene - SO:0000574
- VD_gene - SO:0000510
- VJ_C_cluster - SO:0000489
- VJ_J_C_cluster - SO:0000490
- VJ_J_cluster - SO:0000491
- VJ_gene - SO:0000576
- V_DJ_C_cluster - SO:0000542
- V_DJ_J_C_cluster - SO:0000564
- V_DJ_J_cluster - SO:0000519
- V_DJ_cluster - SO:0000518
- V_D_DJ_C_cluster - SO:0000527
- V_D_DJ_J_C_cluster - SO:0000529
- V_D_DJ_J_cluster - SO:0000530
- V_D_DJ_cluster - SO:0000528
- V_D_J_C_cluster - SO:0000531
- V_D_J_cluster - SO:0000532
- V_J_C_cluster - SO:0000535
- V_J_cluster - SO:0000534
- V_VDJ_C_cluster - SO:0000520
- V_VDJ_J_C_cluster - SO:0000565
- V_VDJ_J_cluster - SO:0000522
- V_VDJ_cluster - SO:0000521
- V_VJ_C_cluster - SO:0000523
- V_VJ_J_C_cluster - SO:0000566
- V_VJ_J_cluster - SO:0000525
- V_VJ_cluster - SO:0000524
- V_cluster - SO:0000526
- V_gene - SO:0000466
- V_gene_recombination_feature - SO:0000538
- V_heptamer - SO:0000533
- V_nonamer - SO:0000536
- V_spacer - SO:0000537
- WC_base_pair - SO:0000029
- X_element - SO:0001497
- X_element_combinatorial_repeat - SO:0001484
- YAC - SO:0000152
- YAC_clone - SO:0000760
- YAC_end - SO:0001498
- Y_RNA - SO:0000405
- Y_prime_element - SO:0001485
- aberrant_processed_transcript - SO:0000681
- active_peptide - SO:0001064
- adaptive_island - SO:0000775
- adjacent_to - adjacent_to
- alanine - SO:0001435
- alanine_tRNA_primary_transcript - SO:0000211
- alanyl_tRNA - SO:0000254
- allele - SO:0001023
- allelically_excluded - SO:0000137
- allelically_excluded_gene - SO:0000897
- allopolyploid - SO:0001256
- alpha_beta_motif - SO:0100008
- alpha_helix - SO:0001117
- alteration_attribute - SO:0001508
- alternate_sequence_site - SO:0001149
- alternately_spliced_gene_encodeing_one_transcript - SO:0000503
- alternately_spliced_gene_encoding_greater_than_one_transcript - SO:0000543
- alternatively_spliced - SO:0000877
- alternatively_spliced_gene_encoding_greater_than_1_polypeptide_coding_regions_overlapping - SO:1001194
- alternatively_spliced_transcript - SO:1001187
- alternatively_spliced_transcript_encoding_greater_than_1_polypeptide_different_start_codon_different_stop_codon_coding_regions_non_overlapping - SO:1001244
- ambisense_ssRNA_viral_sequence - SO:0001202
- amino_acid - SO:0001237
- amino_acid_deletion - SO:0001604
- amino_acid_insertion - SO:0001605
- amino_acid_substitution - SO:0001606
- amplification_origin - SO:0000750
- anchor_binding_site - SO:0000977
- anchor_region - SO:0000931
- aneuploid - SO:0000054
- aneuploid_chromosome - SO:0000550
- annotation_directed_improved_draft - SO:0001489
- anticodon - SO:0001174
- anticodon_loop - SO:0001173
- antiparallel_beta_strand - SO:0001112
- antisense - SO:0000077
- antisense_RNA - SO:0000644
- antisense_primary_transcript - SO:0000645
- apicoplast_chromosome - SO:0001259
- apicoplast_gene - SO:0000091
- apicoplast_sequence - SO:0000743
- aptamer - SO:0000031
- archaeal_intron - SO:1001271
- archaeosine - SO:0001323
- arginine - SO:0001451
- arginine_tRNA_primary_transcript - SO:0000212
- arginyl_tRNA - SO:0001036
- asparagine - SO:0001449
- asparagine_tRNA_primary_transcript - SO:0000213
- asparaginyl_tRNA - SO:0000256
- aspartic_acid - SO:0001453
- aspartic_acid_tRNA_primary_transcript - SO:0000214
- aspartyl_tRNA - SO:0000257
- assembly - SO:0001248
- assembly_component - SO:0000143
- assembly_error_correction - SO:0001525
- associated_with - associated_with
- assortment_derived_aneuploid - SO:0000058
- assortment_derived_aneuploid - SO:0000803
- assortment_derived_deficiency - SO:0000802
- assortment_derived_deficiency - SO:0000052
- assortment_derived_deficiency_plus_duplication - SO:0000554
- assortment_derived_deficiency_plus_duplication - SO:0000801
- assortment_derived_duplication - SO:0000800
- assortment_derived_duplication - SO:0000437
- assortment_derived_variation - SO:0001504
- asx_motif - SO:0001106
- asx_turn - SO:0000912
- asx_turn_left_handed_type_one - SO:0001129
- asx_turn_left_handed_type_two - SO:0001130
- asx_turn_right_handed_type_one - SO:0001132
- asx_turn_right_handed_type_two - SO:0001131
- asymmetric_RNA_internal_loop - SO:0000021
- attB_site - SO:0000943
- attC_site - SO:0000950
- attCtn_site - SO:0001043
- attI_site - SO:0000367
- attL_site - SO:0000944
- attP_site - SO:0000942
- attR_site - SO:0000945
- attenuator - SO:0000140
- autocatalytically_spliced_intron - SO:0000588
- autopolyploid - SO:0001255
- autoregulated - SO:0000471
- autosynaptic_chromosome - SO:1000136
- bacterial_RNApol_promoter - SO:0000613
- bacterial_RNApol_promoter_region - SO:0000843
- bacterial_RNApol_promoter_sigma54 - SO:0001672
- bacterial_RNApol_promoter_sigma_70 - SO:0001671
- bacterial_terminator - SO:0000614
- base - SO:0001236
- base_call_error_correction - SO:0001526
- base_pair - SO:0000028
- benign_variant - SO:0001770
- beta_bulge - SO:0001107
- beta_bulge_loop - SO:0001108
- beta_bulge_loop_five - SO:0001109
- beta_bulge_loop_six - SO:0001110
- beta_strand - SO:0001111
- beta_turn - SO:0001133
- beta_turn_left_handed_type_one - SO:0001134
- beta_turn_left_handed_type_two - SO:0001135
- beta_turn_right_handed_type_one - SO:0001136
- beta_turn_right_handed_type_two - SO:0001137
- beta_turn_type_eight - SO:0001155
- beta_turn_type_six - SO:0001150
- beta_turn_type_six_a - SO:0001151
- beta_turn_type_six_a_one - SO:0001152
- beta_turn_type_six_a_two - SO:0001153
- beta_turn_type_six_b - SO:0001154
- bidirectional_promoter - SO:0000568
- binding_site - SO:0000409
- biochemical_region_of_peptide - SO:0100001
- biological_region - SO:0001411
- biomaterial_region - SO:0001409
- bipartite_duplication - SO:1000149
- bipartite_inversion - SO:1000151
- blocked_reading_frame - SO:0000718
- blunt_end_restriction_enzyme_cleavage_junction - SO:0001693
- blunt_end_restriction_enzyme_cleavage_site - SO:0001691
- bound_by_factor - SO:0000277
- bound_by_nucleic_acid - SO:0000876
- bound_by_protein - SO:0000875
- branch_site - SO:0000611
- cDNA - SO:0000756
- cDNA_clone - SO:0000317
- cDNA_match - SO:0000689
- c_terminal_region - SO:0100015
- canonical_five_prime_splice_site - SO:0000677
- canonical_splice_site - SO:0000675
- canonical_three_prime_splice_site - SO:0000676
- cap - SO:0000581
- capped - SO:0000146
- capped_mRNA - SO:0000862
- capped_primary_transcript - SO:0000861
- cassette_array_member - SO:0005847
- cassette_pseudogene - SO:0001434
- catalytic_residue - SO:0001104
- catmat_left_handed_four - SO:0100005
- catmat_left_handed_three - SO:0100004
- catmat_right_handed_four - SO:0100007
- catmat_right_handed_three - SO:0100006
- central_hydrophobic_region_of_signal_peptide - SO:0100016
- centromere - SO:0000577
- centromere_DNA_Element_I - SO:0001493
- centromere_DNA_Element_II - SO:0001494
- centromere_DNA_Element_III - SO:0001495
- centromeric_repeat - SO:0001797
- chimeric_cDNA_clone - SO:0000810
- chloroplast_DNA - SO:0001033
- chloroplast_chromosome - SO:0000820
- chloroplast_sequence - SO:0000745
- chromoplast_chromosome - SO:0000821
- chromoplast_gene - SO:0000093
- chromoplast_sequence - SO:0000744
- chromosomal_deletion - SO:1000029
- chromosomal_duplication - SO:1000037
- chromosomal_inversion - SO:1000030
- chromosomal_regulatory_element - SO:0000626
- chromosomal_structural_element - SO:0000628
- chromosomal_translocation - SO:1000044
- chromosomal_transposition - SO:0000453
- chromosomal_variation_attribute - SO:0001509
- chromosomally_aberrant_genome - SO:0001524
- chromosome - SO:0000340
- chromosome_arm - SO:0000105
- chromosome_band - SO:0000341
- chromosome_breakage_sequence - SO:0000670
- chromosome_breakpoint - SO:0001021
- chromosome_fission - SO:1000141
- chromosome_number_variation - SO:1000182
- chromosome_part - SO:0000830
- chromosome_structure_variation - SO:1000183
- chromosome_variation - SO:0000240
- circular - SO:0000988
- circular_double_stranded_DNA_chromosome - SO:0000958
- circular_double_stranded_RNA_chromosome - SO:0000967
- circular_single_stranded_DNA_chromosome - SO:0000960
- circular_single_stranded_RNA_chromosome - SO:0000966
- cis_regulatory_frameshift_element - SO:0001427
- cis_splice_site - SO:0001419
- class_II_RNA - SO:0000989
- class_I_RNA - SO:0000990
- cleaved_for_gpi_anchor_region - SO:0001408
- cleaved_initiator_methionine - SO:0000691
- cleaved_peptide_region - SO:0100011
- clip - SO:0000303
- clone - SO:0000151
- clone_attribute - SO:0000787
- clone_end - SO:0001793
- clone_insert - SO:0000753
- clone_insert_end - SO:0000103
- clone_insert_start - SO:0000767
- clone_insert_start - SO:0000179
- cloned - SO:0000788
- cloned_cDNA - SO:0000792
- cloned_cDNA_insert - SO:0000913
- cloned_genomic - SO:0000791
- cloned_genomic_insert - SO:0000914
- cloned_region - SO:0000785
- coding_conserved_region - SO:0000332
- coding_end - SO:0000327
- coding_exon - SO:0000195
- coding_region_of_exon - SO:0001215
- coding_sequence_variant - SO:0001580
- coding_start - SO:0000323
- codon - SO:0000360
- codon_redefined - SO:0000882
- codon_variant - SO:0001581
- coiled_coil - SO:0001080
- cointegrated_plasmid - SO:0001045
- common_variant - SO:0001767
- compensatory_transcript_secondary_structure_variant - SO:0001597
- complete_evidence_for_feature - complete_evidence_for_feature
- complex_3D_structural_variant - SO:0001600
- complex_change_in_transcript - SO:0001577
- complex_change_of_translational_product_variant - SO:0001602
- complex_chromosomal_mutation - SO:1000146
- complex_structural_alteration - SO:0001784
- complex_substitution - SO:1000005
- compositionally_biased_region_of_peptide - SO:0001066
- compound_chromosome - SO:1000042
- compound_chromosome_arm - SO:0000060
- computed_feature - SO:0000309
- computed_feature_by_similarity - SO:0000311
- conformational_change_variant - SO:0001601
- conformational_switch - SO:0001422
- conjugative_transposon - SO:0000371
- connects_on - connects_on
- consensus - SO:0000993
- consensus_mRNA - SO:0000995
- consensus_region - SO:0000994
- conservative_amino_acid_substitution - SO:0001607
- conservative_missense_codon - SO:0001585
- conserved - SO:0000856
- conserved_region - SO:0000330
- contained_by - contained_by
- contains - contains
- contig - SO:0000149
- contig_collection - SO:0001462
- contig_read - SO:0000476
- copy_number_change - SO:0001563
- copy_number_gain - SO:0001742
- copy_number_loss - SO:0001743
- copy_number_variation - SO:0001019
- core_promoter_element - SO:0001660
- cosmid - SO:0000156
- cosmid_clone - SO:0000765
- covalent_binding_site - SO:0001090
- cross_genome_match - SO:0000177
- cross_link - SO:0001087
- cryptic - SO:0000976
- cryptic_gene - SO:0001431
- cryptic_prophage - SO:0001007
- cryptic_splice_acceptor - SO:0001570
- cryptic_splice_donor - SO:0001571
- cryptic_splice_site - SO:0001533
- cryptic_splice_site_variant - SO:0001569
- cryptogene - SO:1001196
- ct_gene - SO:0000092
- cyanelle_chromosome - SO:0000822
- cyanelle_gene - SO:0000094
- cyanelle_sequence - SO:0000746
- cyclic_translocation - SO:1000150
- cysteine - SO:0001447
- cysteine_tRNA_primary_transcript - SO:0000215
- cysteinyl_tRNA - SO:0000258
- cytoplasmic_polypeptide_region - SO:0001073
- dCAPS_primer - SO:0001699
- databank_entry - SO:2000061
- de_novo_variant - SO:0001781
- decayed_exon - SO:0000464
- decreased_polyadenylation_variant - SO:0001803
- decreased_transcript_level_variant - SO:0001541
- decreased_transcript_stability_variant - SO:0001547
- decreased_transcription_rate_variant - SO:0001552
- decreased_translational_product_level - SO:0001555
- defective_conjugative_transposon - SO:0001049
- deficient_interchromosomal_transposition - SO:0000063
- deficient_intrachromosomal_transposition - SO:0000062
- deficient_inversion - SO:1000171
- deficient_translocation - SO:1000147
- delete - SO:0000045
- delete_U - SO:0000918
- deletion - SO:0000159
- deletion_breakpoint - SO:0001415
- deletion_junction - SO:0000687
- derives_from - derives_from
- designed_sequence - SO:0000546
- dexstrosynaptic_chromosome - SO:1000142
- dicistronic - SO:0000879
- dicistronic_mRNA - SO:0000716
- dicistronic_primary_transcript - SO:1001197
- dicistronic_transcript - SO:0000079
- dif_site - SO:0000949
- dihydrouridine - SO:0001228
- dinucleotide_repeat_microsatellite_feature - SO:0000290
- diplotype - SO:0001028
- direct - SO:0001514
- direct_repeat - SO:0000314
- direct_tandem_duplication - SO:1000039
- direction_attribute - SO:0001029
- disconnected_from - disconnected_from
- disease_associated_variant - SO:0001771
- disease_causing_variant - SO:0001772
- dispersed_repeat - SO:0000658
- distal_promoter_element - SO:0001670
- distant_three_prime_recoding_signal - SO:1001287
- disulfide_bond - SO:0001088
- double - SO:0000985
- double_stranded_DNA_chromosome - SO:0000955
- double_stranded_RNA_chromosome - SO:0000965
- double_stranded_cDNA - SO:0000758
- downstream_gene_variant - SO:0001632
- ds_DNA_viral_sequence - SO:0001198
- ds_RNA_viral_sequence - SO:0001169
- ds_oligo - SO:0000442
- duplicated_pseudogene - SO:0001758
- duplication - SO:1000035
- duplication_attribute - SO:0001523
- dye_terminator_read - SO:0001423
- edit_operation - SO:0000916
- edited - SO:0000116
- edited_CDS - SO:0000935
- edited_by_A_to_I_substitution - SO:0000600
- edited_by_C_insertion_and_dinucleotide_insertion - SO:0000598
- edited_by_C_to_U_substitution - SO:0000599
- edited_by_G_addition - SO:0000601
- edited_from - edited_from
- edited_mRNA - SO:0000929
- edited_to - edited_to
- edited_transcript - SO:0000873
- edited_transcript_by_A_to_I_substitution - SO:0000874
- edited_transcript_feature - SO:0000579
- editing_block - SO:0000604
- editing_domain - SO:0000606
- editing_variant - SO:0001544
- eight_cutter_restriction_site - SO:0000251
- elongated_in_frame_polypeptide_C_terminal - SO:0001612
- elongated_in_frame_polypeptide_N_terminal_elongation - SO:0001614
- elongated_out_of_frame_polypeptide_C_terminal - SO:0001613
- elongated_out_of_frame_polypeptide_N_terminal - SO:0001615
- elongated_polypeptide - SO:0001609
- elongated_polypeptide_C_terminal - SO:0001610
- elongated_polypeptide_N_terminal - SO:0001611
- encodes_1_polypeptide - SO:1001188
- encodes_alternate_transcription_start_sites - SO:0001241
- encodes_alternately_spliced_transcripts - SO:0000463
- encodes_different_polypeptides_different_stop - SO:1001190
- encodes_disjoint_polypeptides - SO:1001192
- encodes_greater_than_1_polypeptide - SO:1001189
- encodes_overlapping_peptides - SO:1001195
- encodes_overlapping_peptides_different_start - SO:1001191
- encodes_overlapping_polypeptides_different_start_and_stop - SO:1001193
- end_overlapping_gene - SO:0000072
- endogenous_retroviral_gene - SO:0000100
- endogenous_retroviral_sequence - SO:0000903
- endonuclease_spliced_intron - SO:0001216
- endosomal_localization_signal - SO:0001529
- engineered - SO:0000783
- engineered_DNA - SO:0000793
- engineered_episome - SO:0000779
- engineered_foreign_gene - SO:0000281
- engineered_foreign_region - SO:0000805
- engineered_foreign_repetitive_element - SO:0000293
- engineered_foreign_transposable_element - SO:0000799
- engineered_foreign_transposable_element_gene - SO:0000283
- engineered_fusion_gene - SO:0000288
- engineered_gene - SO:0000280
- engineered_insert - SO:0000915
- engineered_plasmid - SO:0000637
- engineered_region - SO:0000804
- engineered_rescue_region - SO:0000794
- engineered_tag - SO:0000807
- engineered_transposable_element - SO:0000798
- enhanceosome - SO:0001057
- enhancer - SO:0000165
- enhancer_attribute - SO:0000402
- enhancer_binding_site - SO:0001461
- enhancer_bound_by_factor - SO:0000166
- enhancer_trap_construct - SO:0001479
- enzymatic - SO:0001185
- enzymatic_RNA - SO:0000372
- epigenetically_modified - SO:0000133
- epigenetically_modified_gene - SO:0000898
- epigenetically_modified_region - SO:0001720
- episome - SO:0000768
- epitope - SO:0001018
- epoxyqueuosine - SO:0001318
- eukaryotic_terminator - SO:0000951
- evidence_for_feature - evidence_for_feature
- exemplar - SO:0000864
- exemplar_mRNA - SO:0000734
- exemplar_of - exemplar_of
- exon - SO:0000147
- exon_junction - SO:0000333
- exon_loss - SO:0001572
- exon_of_single_exon_gene - SO:0005845
- exon_region - SO:0000852
- exon_variant - SO:0001791
- exonic_splice_enhancer - SO:0000683
- experimental_feature - SO:0001410
- experimental_feature_attribute - SO:0001684
- experimental_result_region - SO:0000703
- experimentally_defined_binding_region - SO:0001696
- experimentally_determined - SO:0000312
- expressed_sequence_assembly - SO:0001428
- expressed_sequence_match - SO:0000102
- external_transcribed_spacer_region - SO:0000640
- extrachromosomal_mobile_genetic_element - SO:0001038
- extramembrane_polypeptide_region - SO:0001072
- feature_attribute - SO:0000733
- fingerprint_map - SO:0001250
- finished_by - finished_by
- finished_genome - SO:0001491
- finishes - finishes
- five_aminomethyl_two_thiouridine - SO:0001363
- five_carbamoylmethyl_two_prime_O_methyluridine - SO:0001368
- five_carbamoylmethyluridine - SO:0001367
- five_carboxyhydroxymethyl_uridine - SO:0001358
- five_carboxyhydroxymethyl_uridine_methyl_ester - SO:0001359
- five_carboxymethylaminomethyl_two_prime_O_methyluridine - SO:0001370
- five_carboxymethylaminomethyl_two_thiouridine - SO:0001371
- five_carboxymethylaminomethyluridine - SO:0001369
- five_carboxymethyluridine - SO:0001374
- five_formyl_two_prime_O_methylcytidine - SO:0001293
- five_formylcytidine - SO:0001286
- five_hydroxymethylcytidine - SO:0001292
- five_hydroxyuridine - SO:0001354
- five_isopentenylaminomethyl_two_prime_O_methyluridine - SO:0001382
- five_isopentenylaminomethyl_two_thiouridine - SO:0001381
- five_isopentenylaminomethyl_uridine - SO:0001380
- five_methoxycarbonylmethyl_two_prime_O_methyluridine - SO:0001361
- five_methoxycarbonylmethyl_two_thiouridine - SO:0001362
- five_methoxycarbonylmethyluridine - SO:0001360
- five_methoxyuridine - SO:0001355
- five_methyl_2_thiouridine - SO:0001351
- five_methylaminomethyl_two_selenouridine - SO:0001366
- five_methylaminomethyl_two_thiouridine - SO:0001365
- five_methylaminomethyluridine - SO:0001364
- five_methylcytidine - SO:0001282
- five_methyldihydrouridine - SO:0001376
- five_methyluridine - SO:0001344
- five_prime_D_heptamer - SO:0000496
- five_prime_D_nonamer - SO:0000497
- five_prime_D_recombination_signal_sequence - SO:0000556
- five_prime_D_spacer - SO:0000498
- five_prime_EST - SO:0001208
- five_prime_LTR - SO:0000425
- five_prime_LTR_component - SO:0000850
- five_prime_RST - SO:0001469
- five_prime_UST - SO:0001466
- five_prime_UTR - SO:0000204
- five_prime_UTR_intron - SO:0000447
- five_prime_cis_splice_site - SO:0000163
- five_prime_clip - SO:0000555
- five_prime_coding_exon - SO:0000200
- five_prime_coding_exon_coding_region - SO:0000196
- five_prime_coding_exon_noncoding_region - SO:0000486
- five_prime_five_prime_overlap - SO:0000074
- five_prime_flanking_region - SO:0001416
- five_prime_intron - SO:0000190
- five_prime_noncoding_exon - SO:0000445
- five_prime_open_reading_frame - SO:0000629
- five_prime_recoding_site - SO:1001280
- five_prime_restriction_enzyme_junction - SO:0001689
- five_prime_terminal_inverted_repeat - SO:0000420
- five_prime_three_prime_overlap - SO:0000073
- five_taurinomethyl_two_thiouridine - SO:0001379
- five_taurinomethyluridine - SO:0001378
- five_two_prime_O_dimethylcytidine - SO:0001287
- five_two_prime_O_dimethyluridine - SO:0001346
- fixed_variant - SO:0001768
- flanked - SO:0000357
- flanking_region - SO:0000239
- flanking_three_prime_quadruplet_recoding_signal - SO:1001281
- floxed - SO:0000359
- floxed_gene - SO:0000363
- foldback_element - SO:0000238
- foreign - SO:0000784
- foreign_gene - SO:0000285
- foreign_transposable_element - SO:0000720
- forward - SO:0001030
- forward_primer - SO:0000121
- fosmid - SO:0000158
- fosmid_clone - SO:0000763
- four_bp_start_codon - SO:1001269
- four_cutter_restriction_site - SO:0000244
- four_demethylwyosine - SO:0001341
- four_thiouridine - SO:0001350
- fragment_assembly - SO:0001249
- fragmentary - SO:0000731
- frame_restoring_sequence_variant - SO:1000110
- frame_restoring_variant - SO:0001591
- frameshift - SO:0000865
- frameshift_sequence_variation - SO:1000065
- frameshift_variant - SO:0001589
- free - SO:0001516
- free_chromosome_arm - SO:0000065
- free_duplication - SO:1000144
- free_ring_duplication - SO:1000145
- functional_variant - SO:0001536
- fusion - SO:0000806
- fusion_gene - SO:0000287
- gRNA_encoding - SO:0000979
- gRNA_gene - SO:0001264
- galactosyl_queuosine - SO:0001319
- gamma_turn - SO:0001138
- gamma_turn_classic - SO:0001139
- gamma_turn_inverse - SO:0001140
- gap - SO:0000730
- gene - SO:0000704
- gene_array - SO:0005851
- gene_array_member - SO:0000081
- gene_attribute - SO:0000401
- gene_by_genome_location - SO:0000085
- gene_by_organelle_of_genome - SO:0000086
- gene_by_polyadenylation_attribute - SO:0000066
- gene_by_transcript_attribute - SO:0000064
- gene_cassette - SO:0005853
- gene_cassette_array - SO:0005854
- gene_cassette_member - SO:0005848
- gene_class - SO:0000009
- gene_component_region - SO:0000842
- gene_fragment - SO:0000997
- gene_fusion - SO:0001565
- gene_group - SO:0005855
- gene_group_regulatory_region - SO:0000752
- gene_member_region - SO:0000831
- gene_not_polyadenylated - SO:0000438
- gene_part - SO:0000050
- gene_rearranged_at_DNA_level - SO:0000138
- gene_segment - SO:3000000
- gene_sensu_your_favorite_organism - SO:0000008
- gene_silenced_by_DNA_methylation - SO:0000129
- gene_silenced_by_DNA_modification - SO:0000128
- gene_silenced_by_RNA_interference - SO:0001224
- gene_silenced_by_histone_deacetylation - SO:0001227
- gene_silenced_by_histone_methylation - SO:0001226
- gene_silenced_by_histone_modification - SO:0001225
- gene_subarray - SO:0005852
- gene_subarray_member - SO:0005849
- gene_to_gene_feature - SO:0000067
- gene_trap_construct - SO:0001477
- gene_variant - SO:0001564
- gene_with_dicistronic_mRNA - SO:0000722
- gene_with_dicistronic_primary_transcript - SO:0000721
- gene_with_dicistronic_transcript - SO:0000692
- gene_with_edited_transcript - SO:0000548
- gene_with_mRNA_recoded_by_translational_bypass - SO:0000711
- gene_with_mRNA_with_frameshift - SO:0000455
- gene_with_non_canonical_start_codon - SO:0001739
- gene_with_polyadenylated_mRNA - SO:0000451
- gene_with_polycistronic_transcript - SO:0000690
- gene_with_recoded_mRNA - SO:0000693
- gene_with_start_codon_CUG - SO:0001740
- gene_with_stop_codon_read_through - SO:0000697
- gene_with_stop_codon_redefined_as_pyrrolysine - SO:0000698
- gene_with_stop_codon_redefined_as_selenocysteine - SO:0000710
- gene_with_trans_spliced_transcript - SO:0000459
- gene_with_transcript_with_translational_frameshift - SO:0000712
- genetic_marker - SO:0001645
- genome - SO:0001026
- genome_of - genome_of
- genomic_DNA - SO:0000991
- genomic_clone - SO:0000040
- genomic_island - SO:0000772
- genomically_contaminated_cDNA_clone - SO:0000811
- genotype - SO:0001027
- germline_variant - SO:0001778
- glutamic_acid - SO:0001454
- glutamic_acid_tRNA_primary_transcript - SO:0000216
- glutamine - SO:0001448
- glutamine_tRNA_primary_transcript - SO:0000217
- glutaminyl_tRNA - SO:0000259
- glutamyl_tRNA - SO:0000260
- glycine - SO:0001443
- glycine_tRNA_primary_transcript - SO:0000218
- glycyl_tRNA - SO:0000261
- golden_path - SO:0000688
- golden_path_fragment - SO:0000468
- group_1_intron_homing_endonuclease_target_region - SO:0000354
- group_IIA_intron - SO:0000381
- group_IIB_intron - SO:0000382
- group_III_intron - SO:0001213
- group_II_intron - SO:0000603
- group_I_intron - SO:0000587
- guide_RNA - SO:0000602
- guide_RNA_region - SO:0000930
- guided_by - guided_by
- guides - guides
- hammerhead_ribozyme - SO:0000380
- haplotype - SO:0001024
- haplotype_block - SO:0000355
- has_integral_part - has_integral_part
- has_origin - has_origin
- has_part - has_part
- has_quality - has_quality
- helitron - SO:0000544
- helix_turn_helix - SO:0001081
- heptamer_of_recombination_feature_of_vertebrate_immune_system_gene - SO:0000561
- heritable_phenotypic_marker - SO:0001500
- hetero_compound_chromosome - SO:1000140
- high_identity_region - SO:0001502
- high_quality_draft - SO:0001487
- histidine - SO:0001452
- histidine_tRNA_primary_transcript - SO:0000219
- histidyl_tRNA - SO:0000262
- histone_acetylation_site - SO:0001702
- histone_acylation_region - SO:0001737
- histone_binding_site - SO:0001383
- histone_methylation_site - SO:0001701
- histone_modification - SO:0001700
- histone_ubiqitination_site - SO:0001716
- homing_endonuclease_binding_site - SO:0001257
- homo_compound_chromosome - SO:1000138
- homologous - SO:0000857
- homologous_region - SO:0000853
- homologous_to - homologous_to
- hydrophobic_region_of_peptide - SO:0100013
- hydroxywybutosine - SO:0001334
- hyperploid - SO:0000055
- hypoploid - SO:0000056
- iDNA - SO:0000723
- i_motif - SO:0001010
- immature_peptide_region - SO:0001063
- imprinted - SO:0000134
- improved_high_quality_draft - SO:0001488
- inactive_catalytic_site - SO:0001618
- inactive_ligand_binding_site - SO:0001560
- incomplete_terminal_codon_variant - SO:0001626
- increased_polyadenylation_variant - SO:0001802
- increased_transcript_level_variant - SO:0001542
- increased_transcript_stability_variant - SO:0001548
- increased_transcription_rate_variant - SO:0001551
- increased_translational_product_level - SO:0001556
- indel - SO:1000032
- independently_known - SO:0000906
- inframe_codon_gain - SO:0001651
- inframe_codon_loss - SO:0001652
- inframe_variant - SO:0001650
- initiator_codon_change - SO:0001582
- inosine - SO:0001230
- insert - SO:0000046
- insert_AA - SO:0000928
- insert_AU - SO:0000927
- insert_C - SO:0000920
- insert_CU - SO:0000926
- insert_G - SO:0000923
- insert_GC - SO:0000924
- insert_GU - SO:0000925
- insert_U - SO:0000917
- insert_dinucleotide - SO:0000921
- insertion - SO:0000667
- insertion_attribute - SO:0001512
- insertion_breakpoint - SO:0001414
- insertion_sequence - SO:0000973
- insertion_site - SO:0000366
- insertional - SO:0001522
- insertional_duplication - SO:1000154
- inside_intron - SO:0000069
- inside_intron_antiparallel - SO:0000070
- inside_intron_parallel - SO:0000071
- insulator - SO:0000627
- insulator_binding_site - SO:0001460
- integral_part_of - integral_part_of
- integrase_coding_region - SO:0000369
- integrated_mobile_genetic_element - SO:0001039
- integrated_plasmid - SO:0001040
- integration_excision_site - SO:0000946
- integron - SO:0000365
- intein - SO:0000728
- intein_containing - SO:0000729
- interband - SO:0000450
- interchromosomal - SO:0001511
- interchromosomal_duplication - SO:0000457
- interchromosomal_mutation - SO:1000031
- interchromosomal_transposition - SO:1000155
- intergenic_region - SO:0000605
- intergenic_variant - SO:0001628
- interior_coding_exon - SO:0000004
- interior_exon - SO:0000201
- interior_intron - SO:0000191
- intermediate - SO:0000933
- intermediate_element - SO:0001677
- internal_Shine_Dalgarno_sequence - SO:1001260
- internal_UTR - SO:0000241
- internal_eliminated_sequence - SO:0000671
- internal_guide_sequence - SO:0001016
- internal_ribosome_entry_site - SO:0000243
- internal_transcribed_spacer_region - SO:0000639
- intrachromosomal - SO:0001510
- intrachromosomal_duplication - SO:1000038
- intrachromosomal_mutation - SO:1000028
- intrachromosomal_transposition - SO:1000041
- intramembrane_polypeptide_region - SO:0001075
- intrinsically_unstructured_polypeptide_region - SO:0100003
- introgressed_chromosome_region - SO:0000664
- intron - SO:0000188
- intron_attribute - SO:0000661
- intron_domain - SO:0001014
- intron_gain - SO:0001573
- intron_variant - SO:0001627
- intronic_regulatory_region - SO:0001492
- intronic_splice_enhancer - SO:0000320
- invalidated - SO:0000790
- invalidated_by_chimeric_cDNA - SO:0000362
- invalidated_by_genomic_contamination - SO:0000414
- invalidated_by_genomic_polyA_primed_cDNA - SO:0000415
- invalidated_by_partial_processing - SO:0000416
- invalidated_cDNA_clone - SO:0000809
- inversion - SO:1000036
- inversion_attribute - SO:0001517
- inversion_breakpoint - SO:0001022
- inversion_cum_translocation - SO:1000148
- inversion_derived_aneuploid_chromosome - SO:0000567
- inversion_derived_bipartite_deficiency - SO:0000461
- inversion_derived_bipartite_duplication - SO:0000547
- inversion_derived_deficiency_plus_aneuploid - SO:0000512
- inversion_derived_deficiency_plus_duplication - SO:0000465
- inversion_derived_duplication_plus_aneuploid - SO:0000549
- inversion_site - SO:0000948
- inversion_site_part - SO:0001048
- invert - SO:0000047
- inverted - SO:0001515
- inverted_insertional_duplication - SO:1000153
- inverted_interchromosomal_transposition - SO:1000156
- inverted_intrachromosomal_transposition - SO:1000158
- inverted_repeat - SO:0000294
- inverted_ring_chromosome - SO:0000439
- inverted_tandem_duplication - SO:1000040
- iron_responsive_element - SO:0001182
- is_consecutive_sequence_of - is_consecutive_sequence_of
- isoleucine - SO:0001438
- isoleucine_tRNA_primary_transcript - SO:0000220
- isoleucyl_tRNA - SO:0000263
- isowyosine - SO:0001342
- junction - SO:0000699
- kinetoplast - SO:0000741
- kinetoplast_gene - SO:0000089
- kozak_sequence - SO:0001647
- laevosynaptic_chromosome - SO:1000143
- lambda_clone - SO:0000160
- lambda_vector - SO:0000754
- large_subunit_rRNA - SO:0000651
- left_handed_peptide_helix - SO:0001115
- lethal_variant - SO:0001773
- leucine - SO:0001437
- leucine_tRNA_primary_transcript - SO:0000221
- leucoplast_chromosome - SO:0000823
- leucoplast_gene - SO:0000095
- leucoplast_sequence - SO:0000747
- leucyl_tRNA - SO:0000264
- level_of_transcript_variant - SO:0001540
- ligand_binding_site - SO:0001657
- ligation_based_read - SO:0001425
- lincRNA - SO:0001463
- lincRNA_gene - SO:0001641
- linear - SO:0000987
- linear_double_stranded_DNA_chromosome - SO:0000957
- linear_double_stranded_RNA_chromosome - SO:0000964
- linear_single_stranded_DNA_chromosome - SO:0000959
- linear_single_stranded_RNA_chromosome - SO:0000963
- linkage_group - SO:0000018
- lipoprotein_signal_peptide - SO:0100009
- locus_control_region - SO:0000037
- long_terminal_repeat - SO:0000286
- loss_of_heterozygosity - SO:0001786
- low_complexity - SO:0001004
- low_complexity_region - SO:0001005
- loxP_site - SO:0000346
- lysidine - SO:0001289
- lysine - SO:0001450
- lysine_tRNA_primary_transcript - SO:0000222
- lysosomal_localization_signal - SO:0001530
- lysyl_tRNA - SO:0000265
- mRNA - SO:0000234
- mRNA_attribute - SO:0000863
- mRNA_by_polyadenylation_status - SO:0000245
- mRNA_not_polyadenylated - SO:0000247
- mRNA_recoded_by_codon_redefinition - SO:1001265
- mRNA_recoded_by_translational_bypass - SO:1001264
- mRNA_region - SO:0000836
- mRNA_with_frameshift - SO:0000108
- mRNA_with_minus_1_frameshift - SO:0000282
- mRNA_with_minus_2_frameshift - SO:0000335
- mRNA_with_plus_1_frameshift - SO:0000321
- mRNA_with_plus_2_frameshift - SO:0000329
- macronuclear_chromosome - SO:0000824
- macronuclear_sequence - SO:0000083
- macronucleus_destined_segment - SO:0000672
- major_TSS - SO:0001238
- mannosyl_queuosine - SO:0001320
- match - SO:0000343
- match_part - SO:0000039
- match_set - SO:0000038
- maternal_uniparental_disomy - SO:0001745
- maternal_variant - SO:0001775
- maternally_imprinted - SO:0000135
- maternally_imprinted_gene - SO:0000888
- mathematically_defined_repeat - SO:0001642
- mating_type_region - SO:0001789
- matrix_attachment_site - SO:0000036
- mature_miRNA_variant - SO:0001620
- mature_protein_region - SO:0000419
- mature_transcript - SO:0000233
- mature_transcript_region - SO:0000834
- maxicircle - SO:0000742
- maxicircle_gene - SO:0000654
- maximally_overlaps - maximally_overlaps
- member_of - member_of
- member_of_regulon - SO:1001217
- membrane_peptide_loop - SO:0001076
- membrane_structure - SO:0001071
- metabolic_island - SO:0000774
- metal_binding_site - SO:0001656
- methionine - SO:0001442
- methionine_tRNA_primary_transcript - SO:0000223
- methionyl_tRNA - SO:0000266
- methylated_A - SO:0000161
- methylated_C - SO:0000114
- methylated_base_feature - SO:0000306
- methylation_guide_snoRNA - SO:0005841
- methylation_guide_snoRNA_primary_transcript - SO:0000580
- methylinosine - SO:0001233
- methylwyosine - SO:0001337
- miRNA - SO:0000276
- miRNA_antiguide - SO:0001473
- miRNA_encoding - SO:0000571
- miRNA_gene - SO:0001265
- miRNA_loop - SO:0001246
- miRNA_primary_transcript - SO:0000647
- miRNA_primary_transcript_region - SO:0001243
- miRNA_stem - SO:0001245
- miRNA_target_site - SO:0000934
- microarray_oligo - SO:0000328
- micronuclear_chromosome - SO:0000825
- micronuclear_sequence - SO:0000084
- microsatellite - SO:0000289
- mini_exon_donor_RNA - SO:0000635
- mini_gene - SO:0000815
- minicircle - SO:0000980
- minicircle_gene - SO:0000975
- minisatellite - SO:0000643
- minor_TSS - SO:0001239
- minus_10_signal - SO:0000175
- minus_12_signal - SO:0001673
- minus_1_frameshift - SO:0000866
- minus_1_frameshift_variant - SO:0001592
- minus_1_translationally_frameshifted - SO:1001262
- minus_24_signal - SO:0001674
- minus_2_frameshift - SO:0000867
- minus_2_frameshift_variant - SO:0001593
- minus_35_signal - SO:0000176
- mirtron - SO:0001034
- missense_codon - SO:0001783
- mitochondrial_DNA - SO:0001032
- mitochondrial_chromosome - SO:0000819
- mitochondrial_sequence - SO:0000737
- mobile - SO:0001234
- mobile_genetic_element - SO:0001037
- mobile_intron - SO:0000666
- modified_L_alanine - SO:0001387
- modified_L_arginine - SO:0001406
- modified_L_asparagine - SO:0001388
- modified_L_aspartic_acid - SO:0001389
- modified_L_cysteine - SO:0001390
- modified_L_glutamic_acid - SO:0001391
- modified_L_glutamine - SO:0001394
- modified_L_histidine - SO:0001398
- modified_L_isoleucine - SO:0001396
- modified_L_leucine - SO:0001401
- modified_L_lysine - SO:0001400
- modified_L_methionine - SO:0001395
- modified_L_phenylalanine - SO:0001397
- modified_L_proline - SO:0001404
- modified_L_selenocysteine - SO:0001402
- modified_L_serine - SO:0001399
- modified_L_threonine - SO:0001392
- modified_L_tryptophan - SO:0001393
- modified_L_tyrosine - SO:0001405
- modified_L_valine - SO:0001403
- modified_RNA_base_feature - SO:0000250
- modified_adenosine - SO:0001273
- modified_amino_acid_feature - SO:0001385
- modified_base - SO:0000305
- modified_cytidine - SO:0001275
- modified_glycine - SO:0001386
- modified_guanosine - SO:0001276
- modified_inosine - SO:0001274
- modified_uridine - SO:0001277
- molecular_contact_region - SO:0100002
- monocistronic - SO:0000878
- monocistronic_mRNA - SO:0000633
- monocistronic_primary_transcript - SO:0000632
- monocistronic_transcript - SO:0000665
- morpholino_backbone - SO:0001183
- morpholino_oligo - SO:0000034
- mt_gene - SO:0000088
- mutated_variant_site - SO:0001148
- mutation_causing_inframe_polypeptide_N_terminal_elongation - SO:1000106
- mutation_causing_out_of_frame_polypeptide_C_terminal_elongation - SO:1000109
- mutation_causing_out_of_frame_polypeptide_N_terminal_elongation - SO:1000107
- mutation_causing_polypeptide_C_terminal_elongation - SO:1000101
- mutation_causing_polypeptide_N_terminal_elongation - SO:1000100
- mutaton_causing_inframe_polypeptide_C_terminal_elongation - SO:1000108
- n_terminal_region - SO:0100014
- natural - SO:0000782
- natural_plasmid - SO:0001476
- natural_transposable_element - SO:0000797
- natural_variant_site - SO:0001147
- ncRNA - SO:0000655
- ncRNA_gene - SO:0001263
- nc_conserved_region - SO:0000334
- nc_primary_transcript - SO:0000483
- nc_transcript_variant - SO:0001619
- negative_sense_ssRNA_viral_sequence - SO:0001200
- negatively_autoregulated - SO:0000473
- negatively_autoregulated_gene - SO:0000891
- nested_region - SO:0001051
- nested_repeat - SO:0001052
- nested_repeat - SO:0001649
- nested_tandem_repeat - SO:0001658
- nested_transposon - SO:0001053
- nested_transposon - SO:0001648
- no_output - SO:0100010
- non_LTR_retrotransposon - SO:0000189
- non_LTR_retrotransposon_polymeric_tract - SO:0000433
- non_adjacent_residues - SO:0001083
- non_canonical_five_prime_splice_site - SO:0000679
- non_canonical_splice_site - SO:0000674
- non_canonical_start_codon - SO:0000680
- non_canonical_three_prime_splice_site - SO:0000678
- non_capped_primary_transcript - SO:0000106
- non_coding_exon_variant - SO:0001792
- non_conservative_amino_acid_substitution - SO:0001608
- non_conservative_missense_codon - SO:0001586
- non_covalent_binding_site - SO:0001091
- non_cytoplasmic_polypeptide_region - SO:0001074
- non_functional_homolog_of - non_functional_homolog_of
- non_processed_pseudogene - SO:0001760
- non_protein_coding - SO:0000011
- non_synonymous_codon - SO:0001583
- non_terminal_residue - SO:0001084
- non_transcribed_region - SO:0000183
- nonamer_of_recombination_feature_of_vertebrate_immune_system_gene - SO:0000562
- noncoding_exon - SO:0000198
- noncoding_region_of_exon - SO:0001214
- noncontiguous_finished - SO:0001490
- nuclear_chromosome - SO:0000828
- nuclear_export_signal - SO:0001531
- nuclear_gene - SO:0000087
- nuclear_localization_signal - SO:0001528
- nuclear_mitochondrial - SO:0000899
- nuclear_mt_pseudogene - SO:0001044
- nuclear_rim_localization_signal - SO:0001534
- nuclear_sequence - SO:0000738
- nuclease_binding_site - SO:0000059
- nuclease_hypersensitive_site - SO:0000322
- nuclease_sensitive_site - SO:0000684
- nucleic_acid - SO:0000348
- nucleomorph_gene - SO:0000097
- nucleomorphic_chromosome - SO:0000829
- nucleomorphic_sequence - SO:0000739
- nucleotide_binding_site - SO:0001655
- nucleotide_match - SO:0000347
- nucleotide_motif - SO:0000714
- nucleotide_to_protein_binding_site - SO:0001654
- octamer_motif - SO:0001258
- oligo - SO:0000696
- oligo_U_tail - SO:0000609
- one_methyl_three_three_amino_three_carboxypropyl_pseudouridine - SO:0001373
- one_methyladenosine - SO:0001295
- one_methylguanosine - SO:0001324
- one_methylinosine - SO:0001278
- one_methylpseudouridine - SO:0001347
- one_two_prime_O_dimethyladenosine - SO:0001314
- one_two_prime_O_dimethylguanosine - SO:0001340
- one_two_prime_O_dimethylinosine - SO:0001279
- open_chromatin_region - SO:0001747
- operator - SO:0000057
- operon - SO:0000178
- operon_member - SO:0000080
- organelle_sequence - SO:0000736
- oriC - SO:0000953
- oriT - SO:0000724
- oriV - SO:0000952
- origin_of_replication - SO:0000296
- orphan - SO:0000910
- orphan_CDS - SO:1001247
- orthologous - SO:0000858
- orthologous_region - SO:0000855
- orthologous_to - orthologous_to
- outron - SO:0001475
- overlapping - SO:0000068
- overlapping_EST_set - SO:0001262
- overlapping_feature_set - SO:0001261
- overlaps - overlaps
- p_element - SO:0001535
- paired_end_fragment - SO:0001790
- paracentric - SO:0001519
- paracentric_inversion - SO:1000047
- parallel_beta_strand - SO:0001113
- paralogous - SO:0000859
- paralogous_region - SO:0000854
- paralogous_to - paralogous_to
- part_of - part_of
- partial_evidence_for_feature - partial_evidence_for_feature
- partially_characterised_chromosomal_mutation - SO:1000175
- partially_processed_cDNA_clone - SO:0000813
- paternal_uniparental_disomy - SO:0001746
- paternal_variant - SO:0001776
- paternally_imprinted - SO:0000136
- paternally_imprinted_gene - SO:0000889
- pathogenic_island - SO:0000773
- pedigree_specific_variant - SO:0001779
- peptide_coil - SO:0100012
- peptide_collection - SO:0001501
- peptide_helix - SO:0001114
- peptide_localization_signal - SO:0001527
- peptidyl - SO:0001407
- pericentric - SO:0001518
- pericentric_inversion - SO:1000046
- peroxywybutosine - SO:0001333
- phage_sequence - SO:0001042
- phagemid - SO:0000157
- phagemid_clone - SO:0000761
- phenylalanine - SO:0001441
- phenylalanine_tRNA_primary_transcript - SO:0000224
- phenylalanyl_tRNA - SO:0000267
- piRNA - SO:0001035
- piRNA_gene - SO:0001638
- pi_helix - SO:0001118
- plasmid - SO:0000155
- plasmid_clone - SO:0000759
- plasmid_gene - SO:0000098
- plasmid_location - SO:0000749
- plasmid_vector - SO:0000755
- plastid_gene - SO:0000090
- plastid_sequence - SO:0000740
- plus_1_frameshift - SO:0000868
- plus_1_frameshift_variant - SO:0001594
- plus_1_translational_frameshift - SO:0001211
- plus_1_translationally_frameshifted - SO:1001263
- plus_2_frameshift variant - SO:0001595
- plus_2_framshift - SO:0000869
- plus_2_translational_frameshift - SO:0001212
- point_centromere - SO:0001794
- point_mutation - SO:1000008
- polinton - SO:0001170
- polyA_primed_cDNA_clone - SO:0000812
- polyA_sequence - SO:0000610
- polyA_signal_sequence - SO:0000551
- polyA_site - SO:0000553
- polyadenylated - SO:0000246
- polyadenylated_mRNA - SO:0000871
- polyadenylation_variant - SO:0001545
- polycistronic - SO:0000880
- polycistronic_gene - SO:0000477
- polycistronic_mRNA - SO:0000634
- polycistronic_primary_transcript - SO:0000631
- polycistronic_transcript - SO:0000078
- polymer_attribute - SO:0000443
- polymerase_synthesis_read - SO:0001426
- polymorphic_sequence_variant - SO:0001025
- polymorphic_variant - SO:0001766
- polypeptide - SO:0000104
- polypeptide_DNA_contact - SO:0100020
- polypeptide_binding_motif - SO:0100018
- polypeptide_calcium_ion_contact_site - SO:0001094
- polypeptide_catalytic_motif - SO:0100019
- polypeptide_cobalt_ion_contact_site - SO:0001095
- polypeptide_conserved_motif - SO:0100017
- polypeptide_conserved_region - SO:0100021
- polypeptide_copper_ion_contact_site - SO:0001096
- polypeptide_domain - SO:0000417
- polypeptide_function_variant - SO:0001554
- polypeptide_fusion - SO:0001616
- polypeptide_gain_of_function_variant - SO:0001557
- polypeptide_iron_ion_contact_site - SO:0001097
- polypeptide_ligand_contact - SO:0001105
- polypeptide_localization_variant - SO:0001558
- polypeptide_loss_of_function_variant - SO:0001559
- polypeptide_magnesium_ion_contact_site - SO:0001098
- polypeptide_manganese_ion_contact_site - SO:0001099
- polypeptide_metal_contact - SO:0001092
- polypeptide_molybdenum_ion_contact_site - SO:0001100
- polypeptide_motif - SO:0001067
- polypeptide_nest_left_right_motif - SO:0001121
- polypeptide_nest_motif - SO:0001120
- polypeptide_nest_right_left_motif - SO:0001122
- polypeptide_nickel_ion_contact_site - SO:0001101
- polypeptide_partial_loss_of_function - SO:0001561
- polypeptide_post_translational_processing_affected - SO:1000123
- polypeptide_post_translational_processing_variant - SO:0001562
- polypeptide_region - SO:0000839
- polypeptide_repeat - SO:0001068
- polypeptide_secondary_structure - SO:0001078
- polypeptide_sequence_variant - SO:0001603
- polypeptide_sequencing_information - SO:0001082
- polypeptide_structural_motif - SO:0001079
- polypeptide_structural_region - SO:0001070
- polypeptide_truncation - SO:0001617
- polypeptide_tungsten_ion_contact_site - SO:0001102
- polypeptide_turn_motif - SO:0001128
- polypeptide_variation_site - SO:0001146
- polypeptide_zinc_ion_contact_site - SO:0001103
- polyploid - SO:0001254
- polypyrimidine_tract - SO:0000612
- population_specific_variant - SO:0001780
- position_of - position_of
- positive_sense_ssRNA_viral_sequence - SO:0001201
- positively_autoregulated - SO:0000475
- positively_autoregulated_gene - SO:0000892
- possible_assembly_error - SO:0000702
- possible_base_call_error - SO:0000701
- post_translationally_modified_region - SO:0001089
- post_translationally_regulated - SO:0000130
- post_translationally_regulated_by_protein_modification - SO:0000469
- post_translationally_regulated_by_protein_stability - SO:0000467
- post_translationally_regulated_gene - SO:0000890
- pre_edited_mRNA - SO:0000932
- pre_edited_region - SO:0000583
- pre_miRNA - SO:0001244
- predicted - SO:0000732
- predicted_ab_initio_computation - SO:0000310
- predicted_by_ab_initio_computation - SO:0000911
- predicted_gene - SO:0000996
- primary_transcript - SO:0000185
- primary_transcript_attribute - SO:0000144
- primary_transcript_region - SO:0000835
- primer - SO:0000112
- primer_binding_site - SO:0005850
- primer_match - SO:0001472
- probe - SO:0000051
- processed - SO:0000900
- processed_from - processed_from
- processed_into - processed_into
- processed_pseudogene - SO:0000043
- processed_transcript - SO:0001503
- processed_transcript_attribute - SO:0000082
- proline - SO:0001439
- proline_tRNA_primary_transcript - SO:0000225
- prolyl_tRNA - SO:0000268
- promoter - SO:0000167
- promoter_element - SO:0001659
- promoter_region - SO:0000832
- promoter_targeting_sequence - SO:0001058
- promoter_trap_construct - SO:0001478
- propeptide - SO:0001062
- propeptide_cleavage_site - SO:0001061
- prophage - SO:0001006
- proplastid_gene - SO:0000096
- proplastid_sequence - SO:0000748
- protein_binding_site - SO:0000410
- protein_coding - SO:0000010
- protein_coding_gene - SO:0001217
- protein_coding_primary_transcript - SO:0000120
- protein_match - SO:0000349
- protein_protein_contact - SO:0001093
- proviral_gene - SO:0000099
- proviral_location - SO:0000751
- proviral_region - SO:0000113
- proximal_promoter_element - SO:0001668
- pseudogene - SO:0000336
- pseudogene_attribute - SO:0000042
- pseudogene_by_unequal_crossing_over - SO:0000044
- pseudogenic_exon - SO:0000507
- pseudogenic_gene_segment - SO:0001741
- pseudogenic_rRNA - SO:0000777
- pseudogenic_region - SO:0000462
- pseudogenic_tRNA - SO:0000778
- pseudogenic_transcript - SO:0000516
- pseudoknot - SO:0000591
- pseudouridine - SO:0001229
- pseudouridylation_guide_snoRNA - SO:0001187
- purine_to_pyrimidine_transversion - SO:1000023
- purine_transition - SO:1000014
- pyrimidine_to_purine_transversion - SO:1000018
- pyrimidine_transition - SO:1000010
- pyrosequenced_read - SO:0001424
- pyrrolysine - SO:0001456
- pyrrolysine_tRNA_primary_transcript - SO:0001178
- pyrrolysyl_tRNA - SO:0000766
- quality_value - SO:0001686
- quantitative_variant - SO:0001774
- queuosine - SO:0001317
- rRNA - SO:0000252
- rRNA_16S - SO:0001000
- rRNA_18S - SO:0000407
- rRNA_21S - SO:0001171
- rRNA_23S - SO:0001001
- rRNA_25S - SO:0001002
- rRNA_28S - SO:0000653
- rRNA_5S - SO:0000652
- rRNA_5_8S - SO:0000375
- rRNA_cleavage_RNA - SO:0005843
- rRNA_cleavage_snoRNA_primary_transcript - SO:0000582
- rRNA_encoding - SO:0000573
- rRNA_gene - SO:0001637
- rRNA_large_subunit_primary_transcript - SO:0000325
- rRNA_primary_transcript - SO:0000209
- rRNA_primary_transcript_region - SO:0000838
- rRNA_small_subunit_primary_transcript - SO:0000255
- random_sequence - SO:0000449
- rare_variant - SO:0001765
- rasiRNA - SO:0000454
- rate_of_transcription_variant - SO:0001550
- read - SO:0000150
- read_pair - SO:0000007
- reading_frame - SO:0000717
- reagent - SO:0000695
- reagent_attribute - SO:0000786
- rearranged_at_DNA_level - SO:0000904
- reciprocal - SO:0001521
- reciprocal_chromosomal_translocation - SO:1000048
- recoded - SO:0000881
- recoded_by_translational_bypass - SO:0000886
- recoded_codon - SO:0000145
- recoded_mRNA - SO:1001261
- recoding_pseudoknot - SO:0000545
- recoding_stimulatory_region - SO:1001268
- recombination_feature - SO:0000298
- recombination_feature_of_rearranged_gene - SO:0000300
- recombination_hotspot - SO:0000339
- recombination_regulatory_region - SO:0001681
- recombination_signal_sequence - SO:0001532
- recombinationally_inverted_gene - SO:0000373
- recombinationally_rearranged - SO:0000940
- recombinationally_rearranged_gene - SO:0000456
- recombinationally_rearranged_vertebrate_immune_system_gene - SO:0000941
- recombined_from - recombined_from
- recombined_to - recombined_to
- recursive_splice_site - SO:0000998
- reference_genome - SO:0001505
- region - SO:0000001
- regional_centromere - SO:0001795
- regional_centromere_central_core - SO:0001796
- regional_centromere_inner_repeat_region - SO:0001798
- regional_centromere_outer_repeat_region - SO:0001799
- regulated - SO:0000119
- regulatory_promoter_element - SO:0001678
- regulatory_region - SO:0005836
- regulatory_region_variant - SO:0001566
- regulon - SO:1001284
- remark - SO:0000700
- repeat_component - SO:0000840
- repeat_family - SO:0000187
- repeat_fragment - SO:0001050
- repeat_region - SO:0000657
- repeat_unit - SO:0000726
- repetitive_element - SO:0000292
- replication_regulatory_region - SO:0001682
- replicon - SO:0001235
- rescue - SO:0000814
- rescue_gene - SO:0000816
- rescue_mini_gene - SO:0000795
- rescue_region - SO:0000411
- resolution_site - SO:0000947
- restriction_enzyme_binding_site - SO:0000061
- restriction_enzyme_cleavage_junction - SO:0001688
- restriction_enzyme_cut_site - SO:0000168
- restriction_enzyme_recognition_site - SO:0001687
- restriction_enzyme_single_strand_overhang - SO:0001695
- restriction_fragment - SO:0000412
- retinoic_acid_responsive_element - SO:0001653
- retrogene - SO:0001219
- retron - SO:1001275
- retrotransposed - SO:0000569
- retrotransposon - SO:0000180
- reverse - SO:0001031
- reverse_Hoogsteen_base_pair - SO:0000501
- reverse_primer - SO:0000132
- rho_dependent_bacterial_terminator - SO:0000981
- rho_independent_bacterial_terminator - SO:0000982
- ribosome_entry_site - SO:0000139
- riboswitch - SO:0000035
- ribothymidine - SO:0001232
- ribozyme - SO:0000374
- ribozymic - SO:0001186
- right_handed_peptide_helix - SO:0001116
- ring_chromosome - SO:1000045
- rolling_circle - SO:0000969
- sarcin_like_RNA_motif - SO:0000024
- satellite_DNA - SO:0000005
- scRNA - SO:0000013
- scRNA_encoding - SO:0000575
- scRNA_gene - SO:0001266
- scRNA_primary_transcript - SO:0000012
- schellmann_loop - SO:0001123
- schellmann_loop_seven - SO:0001124
- schellmann_loop_six - SO:0001125
- score - SO:0001685
- selenocysteine - SO:0001455
- selenocysteine_tRNA_primary_transcript - SO:0005856
- selenocysteinyl_tRNA - SO:0005857
- sequence variant_affecting_transcript_stability - SO:1000082
- sequence_alteration - SO:0001059
- sequence_assembly - SO:0000353
- sequence_attribute - SO:0000400
- sequence_collection - SO:0001260
- sequence_conflict - SO:0001085
- sequence_difference - SO:0000413
- sequence_feature - SO:0000110
- sequence_feature_locating_method - SO:0000308
- sequence_length_variation - SO:0000248
- sequence_location - SO:0000735
- sequence_motif - SO:0001683
- sequence_of - sequence_of
- sequence_operation - SO:0000041
- sequence_rearrangement_feature - SO:0000669
- sequence_replication_mode - SO:0000968
- sequence_secondary_structure - SO:0000002
- sequence_uncertainty - SO:0001086
- sequence_variant - SO:0001060
- sequence_variant_affecting_3D_structure_of_polypeptide - SO:1000111
- sequence_variant_affecting_copy_number - SO:0001020
- sequence_variant_affecting_editing - SO:1000075
- sequence_variant_affecting_gene_structure - SO:1000180
- sequence_variant_affecting_level_of_translational_product - SO:1000102
- sequence_variant_affecting_polyadenylation - SO:0001432
- sequence_variant_affecting_polypeptide_amino_acid_sequence - SO:1000105
- sequence_variant_affecting_polypeptide_function - SO:1000117
- sequence_variant_affecting_rate_of_transcription - SO:1000081
- sequence_variant_affecting_regulatory_region - SO:0000053
- sequence_variant_affecting_splice_acceptor - SO:1000073
- sequence_variant_affecting_splice_donor - SO:1000072
- sequence_variant_affecting_splicing - SO:1000071
- sequence_variant_affecting_transcript_processing - SO:1000070
- sequence_variant_affecting_transcript_secondary_structure - SO:1000126
- sequence_variant_affecting_transcription - SO:1000076
- sequence_variant_affecting_translational_product - SO:1000088
- sequence_variant_causes_exon_loss - SO:1000184
- sequence_variant_causes_intron_gain - SO:1000185
- sequence_variant_causing_amino_acid_coding_codon_change_in_transcript - SO:1000056
- sequence_variant_causing_amino_acid_deletion - SO:1000097
- sequence_variant_causing_amino_acid_insertion - SO:1000096
- sequence_variant_causing_amino_acid_substitution - SO:1000093
- sequence_variant_causing_compensatory_transcript_secondary_structure_mutation - SO:1000127
- sequence_variant_causing_complex_3D_structural_change - SO:1000115
- sequence_variant_causing_complex_change_of_translational_product - SO:1000092
- sequence_variant_causing_conformational_change - SO:1000116
- sequence_variant_causing_conservative_amino_acid_substitution - SO:1000094
- sequence_variant_causing_conservative_missense_codon_change_in_transcript - SO:1000060
- sequence_variant_causing_cryptic_splice_acceptor_activation - SO:1001186
- sequence_variant_causing_cryptic_splice_activation - SO:1000074
- sequence_variant_causing_cryptic_splice_donor_activation - SO:1000186
- sequence_variant_causing_gain_of_function_of_polypeptide - SO:1000125
- sequence_variant_causing_gene_fusion - SO:1000181
- sequence_variant_causing_inactive_catalytic_site - SO:1000120
- sequence_variant_causing_inactive_ligand_binding_site - SO:1000119
- sequence_variant_causing_initiator_codon_change_in_transcript - SO:1000055
- sequence_variant_causing_loss_of_function_of_polypeptide - SO:1000118
- sequence_variant_causing_minus_1_frameshift - SO:1000067
- sequence_variant_causing_minus_2_frameshift - SO:1000069
- sequence_variant_causing_missense_codon_change_in_transcript - SO:1000059
- sequence_variant_causing_no_3D_structural_change - SO:1000112
- sequence_variant_causing_no_change_in_transcript - SO:1000050
- sequence_variant_causing_no_change_of_translational_product - SO:1000089
- sequence_variant_causing_non_synonymous_codon_change_in_transcript - SO:1000058
- sequence_variant_causing_nonconservative_amino_acid_substitution - SO:1000095
- sequence_variant_causing_nonconservative_missense_codon_change_in_transcript - SO:1000061
- sequence_variant_causing_nonsense_codon_change_in_transcript - SO:1000062
- sequence_variant_causing_partial_loss_of_function_of_polypeptide - SO:1000124
- sequence_variant_causing_plus_1_frameshift_mutation - SO:1000066
- sequence_variant_causing_plus_2_frameshift - SO:1000068
- sequence_variant_causing_polypeptide_elongation - SO:1000099
- sequence_variant_causing_polypeptide_fusion - SO:1000134
- sequence_variant_causing_polypeptide_localization_change - SO:1000121
- sequence_variant_causing_polypeptide_post_translational_processing_change - SO:1000122
- sequence_variant_causing_polypeptide_truncation - SO:1000098
- sequence_variant_causing_synonymous_codon_change_in_transcript - SO:1000057
- sequence_variant_causing_terminator_codon_change_in_transcript - SO:1000063
- sequence_variant_decreasing_level_of_translation_product - SO:1000103
- sequence_variant_decreasing_rate_of_transcription - SO:1000078
- sequence_variant_decreasing_transcript_stability - SO:1000084
- sequence_variant_effect - SO:1000132
- sequence_variant_increasing_level_of_translation_product - SO:1000104
- sequence_variant_increasing_rate_of_transcription - SO:1000080
- sequence_variant_increasing_transcript_stability - SO:1000083
- sequence_variant_obs - SO:0000109
- sequence_variation_affecting_coding_sequence - SO:1000054
- sequence_variation_affecting_level_of_transcript - SO:1000085
- sequence_variation_affecting_reading_frame - SO:1000064
- sequence_variation_affecting_transcript - SO:1000049
- sequence_variation_affecting_transcript_sequence - SO:1000079
- sequence_variation_decreasing_level_of_transcript - SO:1000086
- sequence_variation_increasing_level_of_transcript - SO:1000087
- sequencing_primer - SO:0000107
- serine - SO:0001444
- serine_tRNA_primary_transcript - SO:0000226
- serine_threonine_motif - SO:0001126
- serine_threonine_staple_motif - SO:0001127
- serine_threonine_turn - SO:0001141
- seryl_tRNA - SO:0000269
- seven_aminomethyl_seven_deazaguanosine - SO:0001322
- seven_cyano_seven_deazaguanosine - SO:0001321
- seven_deazaguanosine - SO:0001316
- seven_methylguanine - SO:0001231
- seven_methylguanosine - SO:0001326
- shadow_enhancer - SO:0001482
- siRNA - SO:0000646
- signal_peptide - SO:0000418
- silenced - SO:0000893
- silenced_by_DNA_methylation - SO:0000895
- silenced_by_DNA_modification - SO:0000894
- silenced_by_RNA_interference - SO:0001220
- silenced_by_histone_deacetylation - SO:0001223
- silenced_by_histone_methylation - SO:0001222
- silenced_by_histone_modification - SO:0001221
- silenced_gene - SO:0000127
- silencer - SO:0000625
- silent_mutation - SO:0001017
- similar_to - similar_to
- simple_sequence_length_variation - SO:0000207
- single - SO:0000984
- single_strand_restriction_enzyme_cleavage_site - SO:0001694
- single_stranded_DNA_chromosome - SO:0000956
- single_stranded_RNA_chromosome - SO:0000962
- single_stranded_cDNA - SO:0000757
- site - SO:0000408
- site_specific_recombination_target_region - SO:0000342
- six_cutter_restriction_site - SO:0000249
- small_regulatory_ncRNA - SO:0000370
- small_subunit_rRNA - SO:0000650
- snRNA - SO:0000274
- snRNA_encoding - SO:0000623
- snRNA_gene - SO:0001268
- snRNA_primary_transcript - SO:0000231
- snoRNA - SO:0000275
- snoRNA_encoding - SO:0000578
- snoRNA_gene - SO:0001267
- snoRNA_primary_transcript - SO:0000232
- solo_LTR - SO:0001003
- somatic_variant - SO:0001777
- sonicate_fragment - SO:0001253
- specific_recombination_site - SO:0000299
- splice_acceptor_variant - SO:0001574
- splice_donor_5th_base_variant - SO:0001787
- splice_donor_variant - SO:0001575
- splice_enhancer - SO:0000344
- splice_junction - SO:0001421
- splice_region_variant - SO:0001630
- splice_site - SO:0000162
- splice_site_variant - SO:0001629
- spliced_leader_RNA - SO:0000636
- spliceosomal_intron - SO:0000662
- spliceosomal_intron_region - SO:0000841
- splicing_feature - SO:0000682
- splicing_regulatory_region - SO:0001056
- splicing_variant - SO:0001568
- spot_42_RNA - SO:0000389
- ss_RNA_viral_sequence - SO:0001199
- ss_oligo - SO:0000441
- stRNA - SO:0000649
- stRNA_encoding - SO:0000656
- stRNA_gene - SO:0001270
- stRNA_primary_transcript - SO:0000648
- st_turn_left_handed_type_one - SO:0001142
- st_turn_left_handed_type_two - SO:0001143
- st_turn_right_handed_type_one - SO:0001144
- st_turn_right_handed_type_two - SO:0001145
- standard_draft - SO:0001486
- start_codon - SO:0000318
- started_by - started_by
- starts - starts
- status - SO:0000905
- status_of_coding_sequence - SO:1001255
- stem_loop - SO:0000313
- sticky_end_restriction_enzyme_cleavage_site - SO:0001692
- stop_codon - SO:0000319
- stop_codon_read_through - SO:0000883
- stop_codon_readthrough - SO:1001267
- stop_codon_redefined_as_pyrrolysine - SO:0000884
- stop_codon_redefined_as_selenocysteine - SO:0000885
- stop_codon_redefinition_as_pyrrolysine - SO:1001270
- stop_codon_redefinition_as_selenocysteine - SO:1001266
- stop_codon_signal - SO:1001288
- stop_gained - SO:0001587
- stop_lost - SO:0001578
- stop_retained_variant - SO:0001567
- strand_attribute - SO:0000983
- structural_alteration - SO:0001785
- structural_variant - SO:0001537
- substitute - SO:0000048
- substitute_A_to_I - SO:0000919
- substitute_C_to_U - SO:0000922
- substitution - SO:1000002
- sugar_edge_base_pair - SO:0000030
- supercontig - SO:0000148
- supported_by_EST_or_cDNA - SO:0000909
- supported_by_domain_match - SO:0000908
- supported_by_sequence_similarity - SO:0000907
- symbiosis_island - SO:0000776
- symmetric_RNA_internal_loop - SO:0000025
- synonymous_codon - SO:0001588
- syntenic - SO:0000860
- syntenic_region - SO:0005858
- synthetic_oligo - SO:0001247
- synthetic_sequence - SO:0000351
- tRNA - SO:0000253
- tRNA_encoding - SO:0000663
- tRNA_gene - SO:0001272
- tRNA_intron - SO:1001272
- tRNA_primary_transcript - SO:0000210
- tRNA_region - SO:0001172
- tag - SO:0000324
- tandem - SO:0001513
- tandem_duplication - SO:1000173
- tandem_repeat - SO:0000705
- target_site_duplication - SO:0000434
- targeting_vector - SO:0001644
- tasiRNA - SO:0001800
- tasiRNA_primary_transcript - SO:0001801
- telomerase_RNA - SO:0000390
- telomerase_RNA_gene - SO:0001643
- telomere - SO:0000624
- telomeric_repeat - SO:0001496
- template_region - SO:0000978
- terminal_codon_variant - SO:0001625
- terminal_inverted_repeat - SO:0000481
- terminal_inverted_repeat_element - SO:0000208
- terminator - SO:0000141
- terminator_codon_variant - SO:0001590
- terminator_of_type_2_RNApol_III_promoter - SO:0000615
- tetraloop - SO:0001008
- tetranucleotide_repeat_microsatellite_feature - SO:0000641
- theta_replication - SO:0000970
- three_methylcytidine - SO:0001281
- three_methylpseudouridine - SO:0001377
- three_methyluridine - SO:0001372
- three_prime_D_heptamer - SO:0000493
- three_prime_D_nonamer - SO:0000494
- three_prime_D_recombination_signal_sequence - SO:0000570
- three_prime_D_spacer - SO:0000495
- three_prime_EST - SO:0001209
- three_prime_LTR - SO:0000426
- three_prime_LTR_component - SO:0000849
- three_prime_RACE_clone - SO:0001433
- three_prime_RST - SO:0001468
- three_prime_UST - SO:0001465
- three_prime_UTR - SO:0000205
- three_prime_UTR_intron - SO:0000448
- three_prime_cis_splice_site - SO:0000164
- three_prime_clip - SO:0000557
- three_prime_coding_exon - SO:0000202
- three_prime_coding_exon_coding_region - SO:0000197
- three_prime_coding_exon_noncoding_region - SO:0000484
- three_prime_five_prime_overlap - SO:0000076
- three_prime_flanking_region - SO:0001417
- three_prime_intron - SO:0000192
- three_prime_noncoding_exon - SO:0000444
- three_prime_recoding_site - SO:1001277
- three_prime_repeat_recoding_signal - SO:1001286
- three_prime_restriction_enzyme_junction - SO:0001690
- three_prime_stem_loop_structure - SO:1001279
- three_prime_terminal_inverted_repeat - SO:0000421
- three_prime_three_prime_overlap - SO:0000075
- three_ten_helix - SO:0001119
- three_three_amino_three_carboxypropyl_uridine - SO:0001353
- three_two_prime_O_dimethyluridine - SO:0001375
- threonine - SO:0001445
- threonine_tRNA_primary_transcript - SO:0000227
- threonyl_tRNA - SO:0000270
- tiling_path - SO:0000472
- tiling_path_clone - SO:0000480
- tiling_path_fragment - SO:0000474
- tmRNA - SO:0000584
- tmRNA_acceptor_piece - SO:0000770
- tmRNA_coding_piece - SO:0000769
- tmRNA_encoding - SO:0000659
- tmRNA_gene - SO:0001271
- tmRNA_primary_transcript - SO:0000586
- tmRNA_region - SO:0000847
- topologically_defined_region - SO:0001412
- topology_attribute - SO:0000986
- trans_splice_acceptor_site - SO:0000706
- trans_splice_donor_site - SO:0000707
- trans_splice_junction - SO:0001474
- trans_splice_site - SO:0001420
- trans_spliced - SO:0000870
- trans_spliced_from - trans_spliced_from
- trans_spliced_mRNA - SO:0000872
- trans_spliced_to - trans_spliced_to
- trans_spliced_transcript - SO:0000479
- transcribed_cluster - SO:0001457
- transcribed_fragment - SO:0001418
- transcribed_from - transcribed_from
- transcribed_region - SO:0000502
- transcribed_spacer_region - SO:0000638
- transcribed_to - transcribed_to
- transcript - SO:0000673
- transcript_attribute - SO:0000237
- transcript_bound_by_nucleic_acid - SO:0000278
- transcript_bound_by_protein - SO:0000279
- transcript_edited_by_U_insertion/deletion - SO:0000597
- transcript_feature - SO:0000115
- transcript_function_variant - SO:0001538
- transcript_processing_variant - SO:0001543
- transcript_region - SO:0000833
- transcript_secondary_structure_variant - SO:0001596
- transcript_sequence_variant - SO:0001579
- transcript_stability_variant - SO:0001546
- transcript_variant - SO:0001576
- transcript_with_readthrough_stop_codon - SO:0000117
- transcript_with_translational_frameshift - SO:0000118
- transcription_end_site - SO:0000616
- transcription_regulatory_region - SO:0001679
- transcription_variant - SO:0001549
- transcriptional_cis_regulatory_region - SO:0001055
- transcriptionally_constitutive - SO:0000124
- transcriptionally_induced - SO:0000125
- transcriptionally_regulated - SO:0000123
- transcriptionally_repressed - SO:0000126
- transgene - SO:0000902
- transgene_attribute - SO:0000452
- transgenic - SO:0000781
- transgenic_insertion - SO:0001218
- transgenic_transposable_element - SO:0000796
- transit_peptide - SO:0000725
- transition - SO:1000009
- translated_nucleotide_match - SO:0000181
- translates_to - translates_to
- translation_of - translation_of
- translation_regulatory_region - SO:0001680
- translational_frameshift - SO:0001210
- translational_product_function_variant - SO:0001539
- translational_product_level_variant - SO:0001553
- translational_product_structure_variant - SO:0001598
- translationally_frameshifted - SO:0000887
- translationally_regulated - SO:0000131
- translationally_regulated_gene - SO:0000896
- translocate - SO:0000049
- translocation - SO:0000199
- translocation_breakpoint - SO:0001413
- translocation_element - SO:0000686
- translocaton_attribute - SO:0001520
- transmembrane_polypeptide_region - SO:0001077
- transposable_element - SO:0000101
- transposable_element_attribute - SO:0000780
- transposable_element_flanking_region - SO:0000364
- transposable_element_gene - SO:0000111
- transposable_element_insertion_site - SO:0000368
- transposon_fragment - SO:0001054
- transversion - SO:1000017
- trinucleotide_repeat_microsatellite_feature - SO:0000291
- tryptophan - SO:0001440
- tryptophan_tRNA_primary_transcript - SO:0000228
- tryptophanyl_tRNA - SO:0000271
- twintron - SO:0000406
- two_methyladenosine - SO:0001296
- two_methylthio_N6_cis_hydroxyisopentenyl_adenosine - SO:0001303
- two_methylthio_N6_hydroxynorvalyl_carbamoyladenosine - SO:0001309
- two_methylthio_N6_isopentenyladenosine - SO:0001301
- two_methylthio_N6_methyladenosine - SO:0001299
- two_methylthio_N6_threonyl_carbamoyladenosine - SO:0001306
- two_prime_O_methyladenosine - SO:0001298
- two_prime_O_methylcytidine - SO:0001283
- two_prime_O_methylguanosine - SO:0001327
- two_prime_O_methylinosine - SO:0001280
- two_prime_O_methylpseudouridine - SO:0001348
- two_prime_O_methyluridine - SO:0001345
- two_prime_O_ribosyladenosine_phosphate - SO:0001310
- two_prime_O_ribosylguanosine_phosphate - SO:0001331
- two_thio_two_prime_O_methyluridine - SO:0001352
- two_thiocytidine - SO:0001284
- two_thiouridine - SO:0001349
- type_II_enzyme_restriction_site - SO:0000304
- type_I_enzyme_restriction_site - SO:0000284
- tyrosine - SO:0001446
- tyrosine_tRNA_primary_transcript - SO:0000229
- tyrosyl_tRNA - SO:0000272
- ultracontig - SO:0000719
- uncharacterised_chromosomal_mutation - SO:1000170
- undermodified_hydroxywybutosine - SO:0001335
- unedited_region - SO:0000607
- unequally_crossed_over - SO:0000901
- unigene_cluster - SO:0001458
- uninverted_insertional_duplication - SO:1000152
- uninverted_interchromosomal_transposition - SO:1000157
- uninverted_intrachromosomal_transposition - SO:1000159
- unique_variant - SO:0001764
- unitary_pseudogene - SO:0001759
- unoriented_insertional_duplication - SO:1000160
- unoriented_interchromosomal_transposition - SO:1000161
- unoriented_intrachromosomal_transposition - SO:1000162
- untranslated_region_polycistronic_mRNA - SO:0000242
- upstream_AUG_codon - SO:0000630
- upstream_gene_variant - SO:0001631
- uridine_five_oxyacetic_acid - SO:0001356
- uridine_five_oxyacetic_acid_methyl_ester - SO:0001357
- validated - SO:0000789
- validated_cDNA_clone - SO:0000808
- valine - SO:0001436
- valine_tRNA_primary_transcript - SO:0000230
- valyl_tRNA - SO:0000273
- variant_collection - SO:0001507
- variant_frequency - SO:0001763
- variant_genome - SO:0001506
- variant_of - variant_of
- variant_origin - SO:0001762
- variant_phenotype - SO:0001769
- variant_quality - SO:0001761
- vault_RNA - SO:0000404
- vector_replicon - SO:0000440
- vertebrate_immune_system_feature - SO:0000937
- vertebrate_immune_system_gene_recombination_feature - SO:0000301
- vertebrate_immune_system_gene_recombination_signal_feature - SO:0000939
- vertebrate_immune_system_gene_recombination_spacer - SO:0000563
- vertebrate_immunoglobulin_T_cell_receptor_gene_cluster - SO:0000482
- vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster - SO:0000938
- vertebrate_immunoglobulin_T_cell_receptor_rearranged_segment - SO:0000936
- vertebrate_immunoglobulin_T_cell_receptor_segment - SO:0000460
- viral_sequence - SO:0001041
- virtual_sequence - SO:0000499
- whole_genome_sequence_status - SO:0001499
- wild_type - SO:0000817
- wild_type_rescue_gene - SO:0000818
- wobble_base_pair - SO:0001015
- wybutosine - SO:0001332
- wyosine - SO:0001336