Sequence Ontology

A shared vocabulary for biological sequence features and annotations

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lincRNA

SO:0001463

Definition: Long, intervening non-coding RNA. A transcript that does not overlap within the start or end genomic coordinates of a coding gene or pseudogene on either strand.

Comments and references

Definition references: PMID:19182780, PMID:23463798, SO:ke, http://www.gencodegenes.org/gencode_biotypes.html

Synonyms

ScopeValue
exactlarge intervening non-coding RNA
exactlong intergenic non-coding RNA
exactlong intervening non-coding RNA

Identifiers and subsets

Accession: SO:0001463

Persistent URL: http://purl.obolibrary.org/obo/SO_0001463

Alternate IDs: None

Subsets: None

Cross references: None

History summary

Term history is reconstructed from the Git-era ontology files by comparing ontology classes across revisions. Earlier SVN-era changes will be added at a future date.

First seen in Git-era editable history: 2016-12-05 in commit 92e3cae

Most recent Git-era change: 2021-04-23 in commit 296ecdb

Number of changes: 4

Ontology neighborhood diagram

Ontology neighborhood for SO:0001463 Ontology neighborhood graph for SO:0001463 lincRNA. Parent, child, and related nodes can be activated to open their term pages. SO:0001877 lncRNA SO:0001877 lncRNA SO:0001463 lincRNA SO:0001463 lincRNA
The local DAG shows nearby parent, child, and related terms. Each node links to its own term page.

Relationships

Parents

Children

None recorded in the current release neighborhood.

Change history

This timeline summarizes changes identified in SO’s GitHub commit history, including updates to labels, definitions, parent terms, synonyms, subsets, and obsoletion status. It is a best-effort reconstruction and may not include every change to a term. Since only history from GitHub is included at the moment, any term added before the migration from SVN to Git will show as being created in 2016. This will be addressed once SVN history is incorporated.

DateChangeSummaryEvidence
2021-04-23editedTerm stanza touched in repository history296ecdb
#503
2017-10-03synonym addedSynonym added: long intervening non-coding RNA
Scope: exact
84cde51
2017-10-03definition changedDefinition updated
Before: Long intergenic non-coding RNA. A transcript that does not overlap within the start or end genomic coordinates of a coding gene or pseudogene on either strand.
After: Long, intervening non-coding RNA. A transcript that does not overlap within the start or end genomic coordinates of a coding gene or pseudogene on either strand.
84cde51
2016-12-05createdTerm introduced into the editable ontology history
Initial label: lincRNA
Initial definition captured.
Initial parent: SO:0001877
92e3cae