Sequence Ontology

A shared vocabulary for biological sequence features and annotations

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vault_RNA

SO:0000404

Definition: A family of RNAs are found as part of the enigmatic vault ribonucleoprotein complex. The complex consists of a major vault protein (MVP), two minor vault proteins (VPARP and TEP1), and several small untranslated RNA molecules. It has been suggested that the vault complex is involved in drug resistance.

Comments and references

Definition references: http://www.sanger.ac.uk/cgi-bin/Rfam/getacc?RF00006

Synonyms

ScopeValue
exactINSDC_qualifier:vault_RNA
exactvault RNA
broadINSDC_feature:ncRNA

Identifiers and subsets

Accession: SO:0000404

Persistent URL: http://purl.obolibrary.org/obo/SO_0000404

Alternate IDs: None

Subsets: SOFA

Cross references: http://en.wikipedia.org/wiki/Vault_RNA

History summary

Term history is reconstructed from the Git-era ontology files by comparing ontology classes across revisions. Earlier SVN-era changes will be added at a future date.

First seen in Git-era editable history: 2016-12-05 in commit 92e3cae

Most recent Git-era change: 2018-01-26 in commit 5fe48bd

Number of changes: 3

Ontology neighborhood diagram

Ontology neighborhood for SO:0000404 Ontology neighborhood graph for SO:0000404 vault_RNA. Parent, child, and related nodes can be activated to open their term pages. SO:0000655 ncRNA SO:0000655 ncRNA SO:0000404 vault_RNA SO:0000404 vault_RNA
The local DAG shows nearby parent, child, and related terms. Each node links to its own term page.

Relationships

Parents

Children

None recorded in the current release neighborhood.

Change history

This timeline summarizes changes identified in SO’s GitHub commit history, including updates to labels, definitions, parent terms, synonyms, subsets, and obsoletion status. It is a best-effort reconstruction and may not include every change to a term. Since only history from GitHub is included at the moment, any term added before the migration from SVN to Git will show as being created in 2016. This will be addressed once SVN history is incorporated.

DateChangeSummaryEvidence
2018-01-26synonym addedSynonym added: INSDC_qualifier:vault_RNA
Scope: exact
5fe48bd
2018-01-26synonym addedSynonym added: INSDC_feature:ncRNA
Scope: broad
5fe48bd
2016-12-05createdTerm introduced into the editable ontology history
Initial label: vault_RNA
Initial definition captured.
Initial parent: SO:0000655
92e3cae