SO:0002270 - RTE_LINE_retrotransposon

RTE_LINE_retrotransposon

SO:0002270

Definition: RTE retrotransposons are LINE elements (SO:0000194) that contain a domain with homology to the apurinic-apyrimidic (AP) endonucleases in addition to the previously identified reverse transcriptase domain.

Comments and references

Added as per GitHub Issue Request #488 (https://github.com/The-Sequence-Ontology/SO-Ontologies/issues/488)

Definition references: PMID:9729877

Synonyms

Scope	Value
exact	RIT retrotransposon
exact	RTE LINE retrotransposon
exact	RTE retrotransposon

Identifiers and subsets

Accession: SO:0002270

Persistent URL: http://purl.obolibrary.org/obo/SO_0002270

Alternate IDs: None

Subsets: None

Cross references: None

History summary

Term history is reconstructed from the Git-era ontology files by comparing ontology classes across revisions. Earlier SVN-era changes will be added at a future date.

First seen in Git-era editable history: 2020-06-25 in commit d3cf127

Most recent Git-era change: 2020-06-25 in commit d3cf127

Number of changes: 1

Ontology neighborhood diagram

The local DAG shows nearby parent, child, and related terms. Each node links to its own term page.

Relationships

Parents

SO:0000194 - LINE_element

Children

None recorded in the current release neighborhood.

Change history

This timeline summarizes changes identified in SO’s GitHub commit history, including updates to labels, definitions, parent terms, synonyms, subsets, and obsoletion status. It is a best-effort reconstruction and may not include every change to a term. Since only history from GitHub is included at the moment, any term added before the migration from SVN to Git will show as being created in 2016. This will be addressed once SVN history is incorporated.

Date	Change	Summary	Evidence
2020-06-25	created	Term introduced into the editable ontology history Initial label: RTE_LINE_retrotransposon Initial definition captured. Initial parent: SO:0000194	`d3cf127` #488