sequence_variant

SO:0001060

Definition: A sequence_variant is a non exact copy of a sequence_feature or genome exhibiting one or more sequence_alteration.

Comments and references

Definition references: SO:ke

Synonyms

ScopeValue
exactJannovar:sequence_variant
exactVAAST:sequence_variant
exactsequence variant
relatedANNOVAR:unknown

Identifiers and subsets

Accession: SO:0001060

Persistent URL: http://purl.obolibrary.org/obo/SO_0001060

Alternate IDs: None

Subsets: None

Cross references: None

History summary

Term history is reconstructed from the Git-era ontology files by comparing ontology classes across revisions. Earlier SVN-era changes will be added at a future date.

First seen in Git-era editable history: 2016-12-05 in commit 92e3cae

Most recent Git-era change: 2016-12-05 in commit 92e3cae

Number of changes: 1

Ontology neighborhood diagram

Ontology neighborhood for SO:0001060 Ontology neighborhood graph for SO:0001060 sequence_variant. Parent, child, and related nodes can be activated to open their term pages. SO:0001060 sequence_variant SO:0001060 sequence_variant SO:0001537 structural_variant SO:0001537 structural_variant SO:0001536 functional_effect_variant SO:0001536 functional_effect_variant
The local DAG shows nearby parent, child, and related terms. Each node links to its own term page.

Relationships

Parents

None recorded in the current release neighborhood.

Children

Change history

This timeline summarizes changes identified in SO’s GitHub commit history, including updates to labels, definitions, parent terms, synonyms, subsets, and obsoletion status. It is a best-effort reconstruction and may not include every change to a term. Since only history from GitHub is included at the moment, any term added before the migration from SVN to Git will show as being created in 2016. This will be addressed once SVN history is incorporated.

DateChangeSummaryEvidence
2016-12-05createdTerm introduced into the editable ontology history
Initial label: sequence_variant
Initial definition captured.
92e3cae