Sequence Ontology

A shared vocabulary for biological sequence features and annotations

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coding_transcript_intron_variant

SO:0001969

Definition: A transcript variant occurring within an intron of a coding transcript.

Comments and references

Definition references: SO:ke

Synonyms

ScopeValue
exactJannovar:coding_transcript_intron_variant
exactcoding sequence intron variant

Identifiers and subsets

Accession: SO:0001969

Persistent URL: http://purl.obolibrary.org/obo/SO_0001969

Alternate IDs: None

Subsets: None

Cross references: None

History summary

Term history is reconstructed from the Git-era ontology files by comparing ontology classes across revisions. Earlier SVN-era changes will be added at a future date.

First seen in Git-era editable history: 2016-12-05 in commit 92e3cae

Most recent Git-era change: 2016-12-05 in commit 92e3cae

Number of changes: 1

Ontology neighborhood diagram

Ontology neighborhood for SO:0001969 Ontology neighborhood graph for SO:0001969 coding_transcript_intron_variant. Parent, child, and related nodes can be activated to open their term pages. SO:0001968 coding_transcript_variant SO:0001968 coding_transcript_variant SO:0001627 intron_variant SO:0001627 intron_variant SO:0001969 coding_transcript_intron_variant SO:0001969 coding_transcript_intron_variant SO:0002090 3_prime_UTR_intron_variant SO:0002090 3_prime_UTR_intron_variant SO:0002091 5_prime_UTR_intron_variant SO:0002091 5_prime_UTR_intron_variant
The local DAG shows nearby parent, child, and related terms. Each node links to its own term page.

Relationships

Parents

Children

Change history

This timeline summarizes changes identified in SO’s GitHub commit history, including updates to labels, definitions, parent terms, synonyms, subsets, and obsoletion status. It is a best-effort reconstruction and may not include every change to a term. Since only history from GitHub is included at the moment, any term added before the migration from SVN to Git will show as being created in 2016. This will be addressed once SVN history is incorporated.

DateChangeSummaryEvidence
2016-12-05createdTerm introduced into the editable ontology history
Initial label: coding_transcript_intron_variant
Initial definition captured.
Initial parents: SO:0001627, SO:0001968
92e3cae