Sequence Ontology

A shared vocabulary for biological sequence features and annotations

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coding_transcript_variant

SO:0001968

Definition: A transcript variant of a protein coding gene.

Comments and references

Definition references: SO:ke

Synonyms

ScopeValue
exactJannovar:coding_transcript_variant
exactcoding transcript variant

Identifiers and subsets

Accession: SO:0001968

Persistent URL: http://purl.obolibrary.org/obo/SO_0001968

Alternate IDs: None

Subsets: None

Cross references: None

History summary

Term history is reconstructed from the Git-era ontology files by comparing ontology classes across revisions. Earlier SVN-era changes will be added at a future date.

First seen in Git-era editable history: 2016-12-05 in commit 92e3cae

Most recent Git-era change: 2016-12-05 in commit 92e3cae

Number of changes: 1

Ontology neighborhood diagram

Ontology neighborhood for SO:0001968 Ontology neighborhood graph for SO:0001968 coding_transcript_variant. Parent, child, and related nodes can be activated to open their term pages. SO:0001576 transcript_variant SO:0001576 transcript_variant SO:0001968 coding_transcript_variant SO:0001968 coding_transcript_variant SO:0001622 UTR_variant SO:0001622 UTR_variant SO:0001969 coding_transcript_intron_variant SO:0001969 coding_transcript_intron_variant SO:0001580 coding_sequence_variant SO:0001580 coding_sequence_variant
The local DAG shows nearby parent, child, and related terms. Each node links to its own term page.

Relationships

Parents

Children

Change history

This timeline summarizes changes identified in SO’s GitHub commit history, including updates to labels, definitions, parent terms, synonyms, subsets, and obsoletion status. It is a best-effort reconstruction and may not include every change to a term. Since only history from GitHub is included at the moment, any term added before the migration from SVN to Git will show as being created in 2016. This will be addressed once SVN history is incorporated.

DateChangeSummaryEvidence
2016-12-05createdTerm introduced into the editable ontology history
Initial label: coding_transcript_variant
Initial definition captured.
Initial parent: SO:0001576
92e3cae