Sequence Ontology

A shared vocabulary for biological sequence features and annotations

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repeat_component

SO:0000840

Definition: A region of a repeated sequence.

Comments and references

A manufactured to group the parts of repeats, to give them an is_a path back to the root.

Definition references: SO:ke

Synonyms

ScopeValue
exactrepeat component

Identifiers and subsets

Accession: SO:0000840

Persistent URL: http://purl.obolibrary.org/obo/SO_0000840

Alternate IDs: None

Subsets: None

Cross references: None

History summary

Term history is reconstructed from the Git-era ontology files by comparing ontology classes across revisions. Earlier SVN-era changes will be added at a future date.

First seen in Git-era editable history: 2016-12-05 in commit 92e3cae

Most recent Git-era change: 2016-12-05 in commit 92e3cae

Number of changes: 1

Ontology neighborhood diagram

Ontology neighborhood for SO:0000840 Ontology neighborhood graph for SO:0000840 repeat_component. Parent, child, and related nodes can be activated to open their term pages. SO:0001412 topologically_defined_region SO:0001412 topologically_defined_region SO:0000840 repeat_component SO:0000840 repeat_component SO:0001054 transposon_fragment SO:0001054 transposon_fragment SO:0001050 repeat_fragment SO:0001050 repeat_fragment SO:0000848 LTR_component SO:0000848 LTR_component SO:0000433 non_LTR_retrotransposon_polymeric_tract SO:0000433 non_LTR_retrotransposon_polymeric_tract
The local DAG shows nearby parent, child, and related terms. Each node links to its own term page.

Relationships

Parents

Children

Change history

This timeline summarizes changes identified in SO’s GitHub commit history, including updates to labels, definitions, parent terms, synonyms, subsets, and obsoletion status. It is a best-effort reconstruction and may not include every change to a term. Since only history from GitHub is included at the moment, any term added before the migration from SVN to Git will show as being created in 2016. This will be addressed once SVN history is incorporated.

DateChangeSummaryEvidence
2016-12-05createdTerm introduced into the editable ontology history
Initial label: repeat_component
Initial definition captured.
Initial parent: SO:0001412
92e3cae