sense_intronic_lncRNA
SO:0002131
Definition: A long non-coding transcript found within an intron of a coding or non-coding gene, with no overlap of exonic sequence.
Comments and references
Updating the names of sense_intronic_ncRNA (SO:0002131), sense_overlap_ncRNA (SO:0002132), sense_overlap_ncRNA_gene (SO:0002183), and sense_intronic_ncRNA_gene (SO:0002184) to _lncRNA. See GitHub Issue #579.
Definition references: GENECODE:http://www.gencodegenes.org/gencode_biotypes.html
Synonyms
| Scope | Value |
|---|---|
| exact | sense intronic lncRNA |
| exact | sense_intronic |
| exact | sense_intronic_lncRNA |
| exact | sense_intronic_non-coding_RNA |
Identifiers and subsets
Accession: SO:0002131
Persistent URL: http://purl.obolibrary.org/obo/SO_0002131
Alternate IDs: SO:0001903
Subsets: None
Cross references: None
History summary
Term history is reconstructed from the Git-era ontology files by comparing ontology classes across revisions. Earlier SVN-era changes will be added at a future date.
First seen in Git-era editable history: 2016-12-05 in commit 92e3cae
Most recent Git-era change: 2022-10-28 in commit 0ebbac6
Number of changes: 9
Ontology neighborhood diagram
Relationships
Parents
Children
None recorded in the current release neighborhood.
Change history
This timeline summarizes changes identified in SO’s GitHub commit history, including updates to labels, definitions, parent terms, synonyms, subsets, and obsoletion status. It is a best-effort reconstruction and may not include every change to a term. Since only history from GitHub is included at the moment, any term added before the migration from SVN to Git will show as being created in 2016. This will be addressed once SVN history is incorporated.
| Date | Change | Summary | Evidence |
|---|---|---|---|
| 2022-10-28 | label changed | Label changed from sense_intronic_ncRNA to sense_intronic_lncRNA Before: sense_intronic_ncRNA After: sense_intronic_lncRNA | 0ebbac6#579 |
| 2021-04-23 | edited | Term stanza touched in repository history | 296ecdb#503 |
| 2017-10-10 | synonym added | Synonym added: sense_intronic_lncRNA Scope: exact | 49ece8a |
| 2017-10-10 | synonym added | Synonym added: sense intronic lncRNA Scope: exact | 49ece8a |
| 2017-10-03 | alt id added | Alternate ID added: SO:0001903 | 84cde51 |
| 2017-10-03 | parent removed | Parent removed: SO:0000655 | 84cde51 |
| 2017-10-03 | parent added | Parent added: SO:0001877 | 84cde51 |
| 2017-10-03 | definition changed | Definition updated Before: A non-coding transcript found within an intron of a coding or non-coding gene, with no overlap of exonic sequence. After: A long non-coding transcript found within an intron of a coding or non-coding gene, with no overlap of exonic sequence. | 84cde51 |
| 2016-12-05 | created | Term introduced into the editable ontology history Initial label: sense_intronic_ncRNA Initial definition captured. Initial parent: SO:0000655 | 92e3cae |