SO:0002109 - transcribed_processed

transcribed_processed_pseudogene

SO:0002109

Definition: A processed_pseudogene overlapped by locus-specific evidence of transcription.

Comments and references

Term added as part of collaboration with Gencode, adding biotypes used in annotation.

Definition references: GENCODE:http://www.gencodegenes.org/gencode_biotypes.html

Synonyms

Scope	Value
exact	transcribed processed pseudogene

Identifiers and subsets

Accession: SO:0002109

Persistent URL: http://purl.obolibrary.org/obo/SO_0002109

Alternate IDs: None

Subsets: None

Cross references: None

History summary

Term history is reconstructed from the Git-era ontology files by comparing ontology classes across revisions. Earlier SVN-era changes will be added at a future date.

First seen in Git-era editable history: 2016-12-05 in commit 92e3cae

Most recent Git-era change: 2016-12-05 in commit 92e3cae

Number of changes: 1

Ontology neighborhood diagram

The local DAG shows nearby parent, child, and related terms. Each node links to its own term page.

Relationships

Parents

SO:0000043 - processed_pseudogene

Children

None recorded in the current release neighborhood.

Change history

This timeline summarizes changes identified in SO’s GitHub commit history, including updates to labels, definitions, parent terms, synonyms, subsets, and obsoletion status. It is a best-effort reconstruction and may not include every change to a term. Since only history from GitHub is included at the moment, any term added before the migration from SVN to Git will show as being created in 2016. This will be addressed once SVN history is incorporated.

Date	Change	Summary	Evidence
2016-12-05	created	Term introduced into the editable ontology history Initial label: transcribed_processed_pseudogene Initial definition captured. Initial parent: SO:0000043	`92e3cae`