SO:0002018 - conserved_intron

conserved_intron_variant

SO:0002018

Definition: A transcript variant occurring within a conserved region of an intron.

Comments and references

Requested by Uma Paila (UVA) for snpEff.

Definition references: SO:ke

Synonyms

Scope	Value
exact	Jannovar:conserved_intron_variant
exact	conserved intron variant
exact	snpEff:INTRON_CONSERVED

Identifiers and subsets

Accession: SO:0002018

Persistent URL: http://purl.obolibrary.org/obo/SO_0002018

Alternate IDs: None

Subsets: None

Cross references: http://snpeff.sourceforge.net/SnpEff_manual.html

History summary

Term history is reconstructed from the Git-era ontology files by comparing ontology classes across revisions. Earlier SVN-era changes will be added at a future date.

First seen in Git-era editable history: 2016-12-05 in commit 92e3cae

Most recent Git-era change: 2016-12-05 in commit 92e3cae

Number of changes: 1

Ontology neighborhood diagram

The local DAG shows nearby parent, child, and related terms. Each node links to its own term page.

Relationships

Parents

SO:0001627 - intron_variant

Children

None recorded in the current release neighborhood.

Change history

This timeline summarizes changes identified in SO’s GitHub commit history, including updates to labels, definitions, parent terms, synonyms, subsets, and obsoletion status. It is a best-effort reconstruction and may not include every change to a term. Since only history from GitHub is included at the moment, any term added before the migration from SVN to Git will show as being created in 2016. This will be addressed once SVN history is incorporated.

Date	Change	Summary	Evidence
2016-12-05	created	Term introduced into the editable ontology history Initial label: conserved_intron_variant Initial definition captured. Initial parent: SO:0001627	`92e3cae`