3_prime_UTR_truncation

SO:0002015

Definition: A sequence variant that causes the reduction of a the 3' UTR with regard to the reference sequence.

Comments and references

Definition references: SO:ke

Synonyms

ScopeValue
exact3 prime UTR truncation
exactJannovar:3_prime_utr_truncation
exactsnpEff:UTR_3_DELETED

Identifiers and subsets

Accession: SO:0002015

Persistent URL: http://purl.obolibrary.org/obo/SO_0002015

Alternate IDs: None

Subsets: None

Cross references: http://snpeff.sourceforge.net/SnpEff_manual.html

History summary

Term history is reconstructed from the Git-era ontology files by comparing ontology classes across revisions. Earlier SVN-era changes will be added at a future date.

First seen in Git-era editable history: 2016-12-05 in commit 92e3cae

Most recent Git-era change: 2021-07-12 in commit 795c410

Number of changes: 2

Ontology neighborhood diagram

Ontology neighborhood for SO:0002015 Ontology neighborhood graph for SO:0002015 3_prime_UTR_truncation. Parent, child, and related nodes can be activated to open their term pages. SO:0001624 3_prime_UTR_variant SO:0001624 3_prime_UTR_variant SO:0002015 3_prime_UTR_truncation SO:0002015 3_prime_UTR_truncation
The local DAG shows nearby parent, child, and related terms. Each node links to its own term page.

Relationships

Parents

Children

None recorded in the current release neighborhood.

Change history

This timeline summarizes changes identified in SO’s GitHub commit history, including updates to labels, definitions, parent terms, synonyms, subsets, and obsoletion status. It is a best-effort reconstruction and may not include every change to a term. Since only history from GitHub is included at the moment, any term added before the migration from SVN to Git will show as being created in 2016. This will be addressed once SVN history is incorporated.

DateChangeSummaryEvidence
2021-07-12definition changedDefinition updated
Before: A sequence variant that causes the reduction of a the 3' UTR with regard to the reference sequence.
After: A sequence variant that causes the reduction of a the 3' UTR with regard to the reference sequence.
795c410
2016-12-05createdTerm introduced into the editable ontology history
Initial label: 3_prime_UTR_truncation
Initial definition captured.
Initial parent: SO:0001624
92e3cae