Sequence Ontology

A shared vocabulary for biological sequence features and annotations

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splicing_variant

SO:0001568

Definition: A sequence variant that changes the process of splicing.

Comments and references

Definition references: SO:ke

Synonyms

ScopeValue
exactJannovar:splicing_variant
exactsplicing variant

Identifiers and subsets

Accession: SO:0001568

Persistent URL: http://purl.obolibrary.org/obo/SO_0001568

Alternate IDs: None

Subsets: None

Cross references: None

History summary

Term history is reconstructed from the Git-era ontology files by comparing ontology classes across revisions. Earlier SVN-era changes will be added at a future date.

First seen in Git-era editable history: 2016-12-05 in commit 92e3cae

Most recent Git-era change: 2022-04-25 in commit 476626e

Number of changes: 2

Ontology neighborhood diagram

Ontology neighborhood for SO:0001568 Ontology neighborhood graph for SO:0001568 splicing_variant. Parent, child, and related nodes can be activated to open their term pages. SO:0001576 transcript_variant SO:0001576 transcript_variant SO:0001568 splicing_variant SO:0001568 splicing_variant SO:0001569 cryptic_splice_site_variant SO:0001569 cryptic_splice_site_variant SO:0002390 pseudoexon_variant SO:0002390 pseudoexon_variant SO:0001573 intron_gain_variant SO:0001573 intron_gain_variant SO:0001572 exon_loss_variant SO:0001572 exon_loss_variant SO:0001629 splice_site_variant SO:0001629 splice_site_variant SO:0002169 splice_polypyrimidine_tract_variant SO:0002169 splice_polypyrimidine_tract_variant
The local DAG shows nearby parent, child, and related terms. Each node links to its own term page.

Relationships

Parents

Children

Change history

This timeline summarizes changes identified in SO’s GitHub commit history, including updates to labels, definitions, parent terms, synonyms, subsets, and obsoletion status. It is a best-effort reconstruction and may not include every change to a term. Since only history from GitHub is included at the moment, any term added before the migration from SVN to Git will show as being created in 2016. This will be addressed once SVN history is incorporated.

DateChangeSummaryEvidence
2022-04-25xref removedCross reference removed: EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html476626e
2016-12-05createdTerm introduced into the editable ontology history
Initial label: splicing_variant
Initial definition captured.
Initial parent: SO:0001576
92e3cae