Sequence Ontology

A shared vocabulary for biological sequence features and annotations

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guide_RNA

SO:0000602

Definition: A short 3'-uridylated RNA that can form a duplex (except for its post-transcriptionally added oligo_U tail (SO:0000609)) with a stretch of mature edited mRNA.

Comments and references

Definition references: http://www.rna.ucla.edu/index.html

Synonyms

ScopeValue
exactINSDC_qualifier:guide_RNA
exactgRNA
exactguide RNA
broadINSDC_feature:ncRNA

Identifiers and subsets

Accession: SO:0000602

Persistent URL: http://purl.obolibrary.org/obo/SO_0000602

Alternate IDs: None

Subsets: SOFA

Cross references: http://en.wikipedia.org/wiki/Guide_RNA

History summary

Term history is reconstructed from the Git-era ontology files by comparing ontology classes across revisions. Earlier SVN-era changes will be added at a future date.

First seen in Git-era editable history: 2016-12-05 in commit 92e3cae

Most recent Git-era change: 2018-01-26 in commit 5fe48bd

Number of changes: 3

Ontology neighborhood diagram

Ontology neighborhood for SO:0000602 Ontology neighborhood graph for SO:0000602 guide_RNA. Parent, child, and related nodes can be activated to open their term pages. SO:0000655 ncRNA SO:0000655 ncRNA SO:0000602 guide_RNA SO:0000602 guide_RNA SO:0000873 edited_transcript SO:0000873 edited_transcript SO:0000609 oligo_U_tail SO:0000609 oligo_U_tail SO:0000930 guide_RNA_region SO:0000930 guide_RNA_region
The local DAG shows nearby parent, child, and related terms. Each node links to its own term page.

Relationships

Parents

Children

None recorded in the current release neighborhood.

http://purl.obolibrary.org/obo/so#adjacent_to (incoming)

http://purl.obolibrary.org/obo/so#guided_by (incoming)

http://purl.obolibrary.org/obo/so#part_of (incoming)

Change history

This timeline summarizes changes identified in SO’s GitHub commit history, including updates to labels, definitions, parent terms, synonyms, subsets, and obsoletion status. It is a best-effort reconstruction and may not include every change to a term. Since only history from GitHub is included at the moment, any term added before the migration from SVN to Git will show as being created in 2016. This will be addressed once SVN history is incorporated.

DateChangeSummaryEvidence
2018-01-26synonym addedSynonym added: INSDC_qualifier:guide_RNA
Scope: exact
5fe48bd
2018-01-26synonym addedSynonym added: INSDC_feature:ncRNA
Scope: broad
5fe48bd
2016-12-05createdTerm introduced into the editable ontology history
Initial label: guide_RNA
Initial definition captured.
Initial parent: SO:0000655
92e3cae