Sequence Ontology

A shared vocabulary for biological sequence features and annotations

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protein_coding_primary_transcript

SO:0000120

Definition: A primary transcript that, at least in part, encodes one or more proteins.

Comments and references

May contain introns.

Definition references: SO:ke

Synonyms

ScopeValue
exactprotein coding primary transcript
relatedpre mRNA

Identifiers and subsets

Accession: SO:0000120

Persistent URL: http://purl.obolibrary.org/obo/SO_0000120

Alternate IDs: None

Subsets: SOFA

Cross references: None

History summary

Term history is reconstructed from the Git-era ontology files by comparing ontology classes across revisions. Earlier SVN-era changes will be added at a future date.

First seen in Git-era editable history: 2016-12-05 in commit 92e3cae

Most recent Git-era change: 2016-12-05 in commit 92e3cae

Number of changes: 1

Ontology neighborhood diagram

Ontology neighborhood for SO:0000120 Ontology neighborhood graph for SO:0000120 protein_coding_primary_transcript. Parent, child, and related nodes can be activated to open their term pages. SO:0000185 primary_transcript SO:0000185 primary_transcript SO:0000120 protein_coding_primary_transcript SO:0000120 protein_coding_primary_transcript SO:0002112 coding_transcript_with_retained_intron SO:0002112 coding_transcript_with_retained_intron SO:0000932 pre_edited_mRNA SO:0000932 pre_edited_mRNA SO:0002114 NMD_transcript SO:0002114 NMD_transcript
The local DAG shows nearby parent, child, and related terms. Each node links to its own term page.

Relationships

Parents

Children

Change history

This timeline summarizes changes identified in SO’s GitHub commit history, including updates to labels, definitions, parent terms, synonyms, subsets, and obsoletion status. It is a best-effort reconstruction and may not include every change to a term. Since only history from GitHub is included at the moment, any term added before the migration from SVN to Git will show as being created in 2016. This will be addressed once SVN history is incorporated.

DateChangeSummaryEvidence
2016-12-05createdTerm introduced into the editable ontology history
Initial label: protein_coding_primary_transcript
Initial definition captured.
Initial parent: SO:0000185
92e3cae