Repeats and Mobile Elements

From SO Wiki
Jump to: navigation, search

Contents

Working group

Nicole Ruiz, Karen Eilbeck with guidance from Ellen Pritham and Cedric Fershotte

Aims of term development

This working group aims to develop SO terms to provide a better representation of repeat regions and mobile elements in the ontology. While the ontology contains many terms for the annotation of repeats and mobile elements, there is need for improvement.

  • How to organize the ontology using terms with logical definitions and logical reasoner software.
  • Define the relationship between repeats, replicons and mobile elements
  • How to fully annotate nested repeats in a GFF3 annotation, in a way that will validate correctly.

Documentation/Publications

Notes

Related tracker requests

Personal tools
Namespaces

Variants
Actions
Navigation
Toolbox