Updated Dec 1 2006. Maps to SO -version 1.57. New links to SO terms. Changed mapping of MO:genomic_DNA from SO:genomic_sequence to SO:genomic_DNA
| MO Term v1.3.1.1 | "SO Term, v1.57" | Action |
| PhysicalBioSequenceType | ||
| BAC | BAC | deprecate in MO |
| PAC | PAC | deprecate in MO |
| PCR_amplicon | PCR_product | deprecate in MO |
| PCR_primer | ss_oligo | deprecate in MO |
| PCR_primer_forward | forward_primer | deprecate in MO |
| PCR_primer_reverse | reverse_primer | deprecate in MO |
| YAC | YAC | deprecate in MO |
| antibody | retain in MO | |
| cDNA_clone | cDNA_clone | deprecate in MO |
| chromosome | chromosome | deprecate in MO |
| clone_of_unknown_source | clone | deprecate in MO |
| cosmid | cosmid | deprecate in MO |
| ctDNA | chloroplast_DNA | deprecate in MO |
| ds_oligo | ds_oligo | deprecate in MO |
| genomic_DNA | genomic_DNA | retain in MO since it is a child of MO MaterialType |
| mtDNA | mitochondrial_location | deprecate in MO |
| plasmid | plasmid | deprecate in MO |
| polypeptide | polypeptide | deprecate in MO |
| ss_oligo | ss_oligo | deprecate in MO |
| unknown_sequence | Not applicable retain in MO | |
| vector | vector | deprecate in MO |
| TheoreticalBioSequenceType | ||
| EST | EST | deprecate in MO |
| ORF | ORF | deprecate in MO |
| chromosome | chromosome | deprecate in MO |
| consensus_DNA | consensus_region | deprecate in MO |
| consensus_mRNA | consensus_mRNA | deprecate in MO |
| exemplar_mRNA | exemplar_mRNA | deprecate in MO |
| exon | exon | deprecate in MO |
| gene | gene | deprecate in MO |
| gene_fragment | gene_fragment | deprecate in MO |
| intergenic | intergenic_region | deprecate in MO |
| intron | intron | deprecate in MO |
| mRNA | mRNA | deprecate in MO |
| operon | operon | deprecate in MO |
| polypeptide | polypeptide | deprecate in MO |
| predicted_gene | predicted_gene | deprecate in MO |
| promoter | promoter | deprecate in MO |
| rRNA_gene | rRNA | deprecate in MO |
| snRNA_gene | snRNA | deprecate in MO |
| tRNA_gene | tRNA | deprecate in MO |
| transcript | transcript | deprecate in MO |
| unknown_sequence | Not applicable retain in MO | |