SO:0002238 - cytosolic_rRNA_5S

cytosolic_rRNA_5S_gene

SO:0002238

Definition: A gene which codes for 5S_rRNA, which is a portion of the large subunit of the ribosome in both eukaryotes and prokaryotes.

Comments and references

Added as per request by Antonia Lock GitHub issue #472 (https://github.com/The-Sequence-Ontology/SO-Ontologies/issues/472). Adjusted heirarchy and names of rRNA_gene terms at the request of Steven Marygold GitHub Issue #513 (https://github.com/The-Sequence-Ontology/SO-Ontologies/issues/513).

Synonyms

Scope	Value
exact	5S rRNA gene
exact	5S_rRNA_gene

Identifiers and subsets

Accession: SO:0002238

Persistent URL: http://purl.obolibrary.org/obo/SO_0002238

Alternate IDs: None

Subsets: None

Cross references: None

History summary

Term history is reconstructed from the Git-era ontology files by comparing ontology classes across revisions. Earlier SVN-era changes will be added at a future date.

First seen in Git-era editable history: 2020-05-07 in commit 127f8d4

Most recent Git-era change: 2022-08-22 in commit 60704ed

Number of changes: 7

Ontology neighborhood diagram

The local DAG shows nearby parent, child, and related terms. Each node links to its own term page.

Relationships

Parents

SO:0002361 - cytosolic_LSU_rRNA_gene

Children

None recorded in the current release neighborhood.

http://purl.obolibrary.org/obo/so#derives_from (incoming)

SO:0000652 - cytosolic_5S_rRNA

Change history

This timeline summarizes changes identified in SO’s GitHub commit history, including updates to labels, definitions, parent terms, synonyms, subsets, and obsoletion status. It is a best-effort reconstruction and may not include every change to a term. Since only history from GitHub is included at the moment, any term added before the migration from SVN to Git will show as being created in 2016. This will be addressed once SVN history is incorporated.

Date	Change	Summary	Evidence
2022-08-22	edited	Term stanza touched in repository history	`60704ed` #513
2021-11-18	parent removed	Parent removed: SO:0001637	`1d292ea`
2021-11-18	parent added	Parent added: SO:0002361	`1d292ea`
2021-11-18	label changed	Label changed from rRNA_5S_gene to cytosolic_rRNA_5S_gene Before: rRNA_5S_gene After: cytosolic_rRNA_5S_gene	`1d292ea`
2021-06-10	edited	Term stanza touched in repository history	`4a4c8db` #493
2020-05-27	edited	Term stanza touched in repository history	`b13f9f0`
2020-05-07	created	Term introduced into the editable ontology history Initial label: rRNA_5S_gene Initial definition captured. Initial parent: SO:0001637	`127f8d4` #472